Gene : Carub.0005s0784 C. rubella v1.1
Defline:  (1 of 63) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  784
Name:  ? Carub.0005s0784 Secondary Identifier:  ? PAC:39226323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0784 0.5kb upstream 0.5kb upstream 1052 true scaffold_5: 3459444-3460495 Capsella rubella
Carub.0005s0784 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3459996-3460495 Capsella rubella
Carub.0005s0784 0.5kb downstream 0.5kb downstream 1052 true scaffold_5: 3458944-3459995 Capsella rubella
Carub.0005s0784 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3458944-3459443 Capsella rubella
Carub.0005s0784 1.0kb upstream 1.0kb upstream 1552 true scaffold_5: 3459444-3460995 Capsella rubella
Carub.0005s0784 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3459996-3460995 Capsella rubella
Carub.0005s0784 1.0kb downstream 1.0kb downstream 1552 true scaffold_5: 3458444-3459995 Capsella rubella
Carub.0005s0784 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3458444-3459443 Capsella rubella
Carub.0005s0784 2.0kb upstream 2.0kb upstream 2552 true scaffold_5: 3459444-3461995 Capsella rubella
Carub.0005s0784 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3459996-3461995 Capsella rubella
Carub.0005s0784 2.0kb downstream 2.0kb downstream 2552 true scaffold_5: 3457444-3459995 Capsella rubella
Carub.0005s0784 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3457444-3459443 Capsella rubella
Carub.0005s0784 5.0kb upstream 5.0kb upstream 5552 true scaffold_5: 3459444-3464995 Capsella rubella
Carub.0005s0784 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3459996-3464995 Capsella rubella
Carub.0005s0784 5.0kb downstream 5.0kb downstream 5552 true scaffold_5: 3454444-3459995 Capsella rubella
Carub.0005s0784 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3454444-3459443 Capsella rubella
Carub.0005s0784 10.0kb upstream 10.0kb upstream 10552 true scaffold_5: 3459444-3469995 Capsella rubella
Carub.0005s0784 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3459996-3469995 Capsella rubella
Carub.0005s0784 10.0kb downstream 10.0kb downstream 10552 true scaffold_5: 3449444-3459995 Capsella rubella
Carub.0005s0784 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3449444-3459443 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380476 5261 Brassicaceae View MSA
123802737 5264 Brassicales-Malvales View MSA
124299905 5266 SBM View MSA
124151206 5268 Malvidae View MSA
124050185 5270 Rosid View MSA
123741450 5271 Pentapetalae View MSA
122770052 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain