Gene : Carub.0005s0796 C. rubella v1.1

Defline:  (1 of 3) 1.1.1.51 - 3(or 17)-beta-hydroxysteroid dehydrogenase Genomic Order:  796
Name:  ? Carub.0005s0796 Secondary Identifier:  ? PAC:39224868

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0796 0.5kb upstream 0.5kb upstream 1543 true scaffold_5: 3528277-3529819 Capsella rubella
Carub.0005s0796 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3529320-3529819 Capsella rubella
Carub.0005s0796 0.5kb downstream 0.5kb downstream 1543 true scaffold_5: 3527777-3529319 Capsella rubella
Carub.0005s0796 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3527777-3528276 Capsella rubella
Carub.0005s0796 1.0kb upstream 1.0kb upstream 2043 true scaffold_5: 3528277-3530319 Capsella rubella
Carub.0005s0796 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3529320-3530319 Capsella rubella
Carub.0005s0796 1.0kb downstream 1.0kb downstream 2043 true scaffold_5: 3527277-3529319 Capsella rubella
Carub.0005s0796 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3527277-3528276 Capsella rubella
Carub.0005s0796 2.0kb upstream 2.0kb upstream 3043 true scaffold_5: 3528277-3531319 Capsella rubella
Carub.0005s0796 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3529320-3531319 Capsella rubella
Carub.0005s0796 2.0kb downstream 2.0kb downstream 3043 true scaffold_5: 3526277-3529319 Capsella rubella
Carub.0005s0796 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3526277-3528276 Capsella rubella
Carub.0005s0796 5.0kb upstream 5.0kb upstream 6043 true scaffold_5: 3528277-3534319 Capsella rubella
Carub.0005s0796 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3529320-3534319 Capsella rubella
Carub.0005s0796 5.0kb downstream 5.0kb downstream 6043 true scaffold_5: 3523277-3529319 Capsella rubella
Carub.0005s0796 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3523277-3528276 Capsella rubella
Carub.0005s0796 10.0kb upstream 10.0kb upstream 11043 true scaffold_5: 3528277-3539319 Capsella rubella
Carub.0005s0796 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3529320-3539319 Capsella rubella
Carub.0005s0796 10.0kb downstream 10.0kb downstream 11043 true scaffold_5: 3518277-3529319 Capsella rubella
Carub.0005s0796 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3518277-3528276 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373847 5261 Brassicaceae View MSA
123841481 5264 Brassicales-Malvales View MSA
124340680 5266 SBM View MSA
124251999 5268 Malvidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain