Gene : Carub.0005s0815 C. rubella v1.1
Defline:  (1 of 1) PTHR12542:SF34 - EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E1 Genomic Order:  815
Name:  ? Carub.0005s0815 Secondary Identifier:  ? PAC:39226048
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0815 0.5kb upstream 0.5kb upstream 2896 true scaffold_5: 3641703-3644598 Capsella rubella
Carub.0005s0815 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3644099-3644598 Capsella rubella
Carub.0005s0815 0.5kb downstream 0.5kb downstream 2896 true scaffold_5: 3641203-3644098 Capsella rubella
Carub.0005s0815 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3641203-3641702 Capsella rubella
Carub.0005s0815 1.0kb upstream 1.0kb upstream 3396 true scaffold_5: 3641703-3645098 Capsella rubella
Carub.0005s0815 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3644099-3645098 Capsella rubella
Carub.0005s0815 1.0kb downstream 1.0kb downstream 3396 true scaffold_5: 3640703-3644098 Capsella rubella
Carub.0005s0815 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3640703-3641702 Capsella rubella
Carub.0005s0815 2.0kb upstream 2.0kb upstream 4396 true scaffold_5: 3641703-3646098 Capsella rubella
Carub.0005s0815 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3644099-3646098 Capsella rubella
Carub.0005s0815 2.0kb downstream 2.0kb downstream 4396 true scaffold_5: 3639703-3644098 Capsella rubella
Carub.0005s0815 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3639703-3641702 Capsella rubella
Carub.0005s0815 5.0kb upstream 5.0kb upstream 7396 true scaffold_5: 3641703-3649098 Capsella rubella
Carub.0005s0815 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3644099-3649098 Capsella rubella
Carub.0005s0815 5.0kb downstream 5.0kb downstream 7396 true scaffold_5: 3636703-3644098 Capsella rubella
Carub.0005s0815 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3636703-3641702 Capsella rubella
Carub.0005s0815 10.0kb upstream 10.0kb upstream 12396 true scaffold_5: 3641703-3654098 Capsella rubella
Carub.0005s0815 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3644099-3654098 Capsella rubella
Carub.0005s0815 10.0kb downstream 10.0kb downstream 12396 true scaffold_5: 3631703-3644098 Capsella rubella
Carub.0005s0815 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3631703-3641702 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360661 5261 Brassicaceae View MSA
123828637 5264 Brassicales-Malvales View MSA
124340647 5266 SBM View MSA
124243589 5268 Malvidae View MSA
124065145 5270 Rosid View MSA
123739554 5271 Pentapetalae View MSA
122790247 5272 Eudicot View MSA
122047243 5273 Angiosperm View MSA
121310714 5274 Embryophyte View MSA
123348132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain