Gene : Carub.0005s0649 C. rubella v1.1
Defline:  (1 of 1) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  649
Name:  ? Carub.0005s0649 Secondary Identifier:  ? PAC:39225925
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0649 0.5kb upstream 0.5kb upstream 3044 true scaffold_5: 2677150-2680193 Capsella rubella
Carub.0005s0649 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2679694-2680193 Capsella rubella
Carub.0005s0649 0.5kb downstream 0.5kb downstream 3044 true scaffold_5: 2676650-2679693 Capsella rubella
Carub.0005s0649 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2676650-2677149 Capsella rubella
Carub.0005s0649 1.0kb upstream 1.0kb upstream 3544 true scaffold_5: 2677150-2680693 Capsella rubella
Carub.0005s0649 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2679694-2680693 Capsella rubella
Carub.0005s0649 1.0kb downstream 1.0kb downstream 3544 true scaffold_5: 2676150-2679693 Capsella rubella
Carub.0005s0649 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2676150-2677149 Capsella rubella
Carub.0005s0649 2.0kb upstream 2.0kb upstream 4544 true scaffold_5: 2677150-2681693 Capsella rubella
Carub.0005s0649 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2679694-2681693 Capsella rubella
Carub.0005s0649 2.0kb downstream 2.0kb downstream 4544 true scaffold_5: 2675150-2679693 Capsella rubella
Carub.0005s0649 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2675150-2677149 Capsella rubella
Carub.0005s0649 5.0kb upstream 5.0kb upstream 7544 true scaffold_5: 2677150-2684693 Capsella rubella
Carub.0005s0649 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2679694-2684693 Capsella rubella
Carub.0005s0649 5.0kb downstream 5.0kb downstream 7544 true scaffold_5: 2672150-2679693 Capsella rubella
Carub.0005s0649 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2672150-2677149 Capsella rubella
Carub.0005s0649 10.0kb upstream 10.0kb upstream 12544 true scaffold_5: 2677150-2689693 Capsella rubella
Carub.0005s0649 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2679694-2689693 Capsella rubella
Carub.0005s0649 10.0kb downstream 10.0kb downstream 12544 true scaffold_5: 2667150-2679693 Capsella rubella
Carub.0005s0649 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2667150-2677149 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361060 5261 Brassicaceae View MSA
123831953 5264 Brassicales-Malvales View MSA
124341651 5266 SBM View MSA
124240177 5268 Malvidae View MSA
124067887 5270 Rosid View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain