Gene : Carub.0005s0641 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  641
Name:  ? Carub.0005s0641 Secondary Identifier:  ? PAC:39224099
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0641 0.5kb upstream 0.5kb upstream 2237 true scaffold_5: 2634308-2636544 Capsella rubella
Carub.0005s0641 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2634308-2634807 Capsella rubella
Carub.0005s0641 0.5kb downstream 0.5kb downstream 2237 true scaffold_5: 2634808-2637044 Capsella rubella
Carub.0005s0641 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2636545-2637044 Capsella rubella
Carub.0005s0641 1.0kb upstream 1.0kb upstream 2737 true scaffold_5: 2633808-2636544 Capsella rubella
Carub.0005s0641 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2633808-2634807 Capsella rubella
Carub.0005s0641 1.0kb downstream 1.0kb downstream 2737 true scaffold_5: 2634808-2637544 Capsella rubella
Carub.0005s0641 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2636545-2637544 Capsella rubella
Carub.0005s0641 2.0kb upstream 2.0kb upstream 3737 true scaffold_5: 2632808-2636544 Capsella rubella
Carub.0005s0641 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2632808-2634807 Capsella rubella
Carub.0005s0641 2.0kb downstream 2.0kb downstream 3737 true scaffold_5: 2634808-2638544 Capsella rubella
Carub.0005s0641 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2636545-2638544 Capsella rubella
Carub.0005s0641 5.0kb upstream 5.0kb upstream 6737 true scaffold_5: 2629808-2636544 Capsella rubella
Carub.0005s0641 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2629808-2634807 Capsella rubella
Carub.0005s0641 5.0kb downstream 5.0kb downstream 6737 true scaffold_5: 2634808-2641544 Capsella rubella
Carub.0005s0641 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2636545-2641544 Capsella rubella
Carub.0005s0641 10.0kb upstream 10.0kb upstream 11737 true scaffold_5: 2624808-2636544 Capsella rubella
Carub.0005s0641 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2624808-2634807 Capsella rubella
Carub.0005s0641 10.0kb downstream 10.0kb downstream 11737 true scaffold_5: 2634808-2646544 Capsella rubella
Carub.0005s0641 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2636545-2646544 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370178 5261 Brassicaceae View MSA
123827473 5264 Brassicales-Malvales View MSA
124321465 5266 SBM View MSA
124242229 5268 Malvidae View MSA
124069028 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain