Gene : Carub.0005s0653 C. rubella v1.1
Defline:  (1 of 2) PTHR12801:SF56 - EXONUCLEASE FAMILY PROTEIN Genomic Order:  653
Name:  ? Carub.0005s0653 Secondary Identifier:  ? PAC:39225037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0653 0.5kb upstream 0.5kb upstream 2464 true scaffold_5: 2696506-2698969 Capsella rubella
Carub.0005s0653 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2696506-2697005 Capsella rubella
Carub.0005s0653 0.5kb downstream 0.5kb downstream 2464 true scaffold_5: 2697006-2699469 Capsella rubella
Carub.0005s0653 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2698970-2699469 Capsella rubella
Carub.0005s0653 1.0kb upstream 1.0kb upstream 2964 true scaffold_5: 2696006-2698969 Capsella rubella
Carub.0005s0653 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2696006-2697005 Capsella rubella
Carub.0005s0653 1.0kb downstream 1.0kb downstream 2964 true scaffold_5: 2697006-2699969 Capsella rubella
Carub.0005s0653 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2698970-2699969 Capsella rubella
Carub.0005s0653 2.0kb upstream 2.0kb upstream 3964 true scaffold_5: 2695006-2698969 Capsella rubella
Carub.0005s0653 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2695006-2697005 Capsella rubella
Carub.0005s0653 2.0kb downstream 2.0kb downstream 3964 true scaffold_5: 2697006-2700969 Capsella rubella
Carub.0005s0653 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2698970-2700969 Capsella rubella
Carub.0005s0653 5.0kb upstream 5.0kb upstream 6964 true scaffold_5: 2692006-2698969 Capsella rubella
Carub.0005s0653 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2692006-2697005 Capsella rubella
Carub.0005s0653 5.0kb downstream 5.0kb downstream 6964 true scaffold_5: 2697006-2703969 Capsella rubella
Carub.0005s0653 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2698970-2703969 Capsella rubella
Carub.0005s0653 10.0kb upstream 10.0kb upstream 11964 true scaffold_5: 2687006-2698969 Capsella rubella
Carub.0005s0653 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2687006-2697005 Capsella rubella
Carub.0005s0653 10.0kb downstream 10.0kb downstream 11964 true scaffold_5: 2697006-2708969 Capsella rubella
Carub.0005s0653 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2698970-2708969 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380390 5261 Brassicaceae View MSA
123832480 5264 Brassicales-Malvales View MSA
124338970 5266 SBM View MSA
124240653 5268 Malvidae View MSA
124063595 5270 Rosid View MSA
123750335 5271 Pentapetalae View MSA
122794102 5272 Eudicot View MSA
122048562 5273 Angiosperm View MSA
121349670 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain