Gene : Carub.0005s0889 C. rubella v1.1
Defline:  (1 of 2) 2.7.1.46 - L-arabinokinase Genomic Order:  889
Name:  ? Carub.0005s0889 Secondary Identifier:  ? PAC:39226515
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-82 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0889 0.5kb upstream 0.5kb upstream 5822 true scaffold_5: 5101439-5107260 Capsella rubella
Carub.0005s0889 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5106761-5107260 Capsella rubella
Carub.0005s0889 0.5kb downstream 0.5kb downstream 5822 true scaffold_5: 5100939-5106760 Capsella rubella
Carub.0005s0889 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5100939-5101438 Capsella rubella
Carub.0005s0889 1.0kb upstream 1.0kb upstream 6322 true scaffold_5: 5101439-5107760 Capsella rubella
Carub.0005s0889 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5106761-5107760 Capsella rubella
Carub.0005s0889 1.0kb downstream 1.0kb downstream 6322 true scaffold_5: 5100439-5106760 Capsella rubella
Carub.0005s0889 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5100439-5101438 Capsella rubella
Carub.0005s0889 2.0kb upstream 2.0kb upstream 7322 true scaffold_5: 5101439-5108760 Capsella rubella
Carub.0005s0889 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5106761-5108760 Capsella rubella
Carub.0005s0889 2.0kb downstream 2.0kb downstream 7322 true scaffold_5: 5099439-5106760 Capsella rubella
Carub.0005s0889 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5099439-5101438 Capsella rubella
Carub.0005s0889 5.0kb upstream 5.0kb upstream 10322 true scaffold_5: 5101439-5111760 Capsella rubella
Carub.0005s0889 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5106761-5111760 Capsella rubella
Carub.0005s0889 5.0kb downstream 5.0kb downstream 10322 true scaffold_5: 5096439-5106760 Capsella rubella
Carub.0005s0889 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5096439-5101438 Capsella rubella
Carub.0005s0889 10.0kb upstream 10.0kb upstream 15322 true scaffold_5: 5101439-5116760 Capsella rubella
Carub.0005s0889 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5106761-5116760 Capsella rubella
Carub.0005s0889 10.0kb downstream 10.0kb downstream 15322 true scaffold_5: 5091439-5106760 Capsella rubella
Carub.0005s0889 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5091439-5101438 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511597 5273 Angiosperm View MSA
122377641 5261 Brassicaceae View MSA
123801591 5264 Brassicales-Malvales View MSA
124298874 5266 SBM View MSA
124150418 5268 Malvidae View MSA
123876033 5270 Rosid View MSA
123459764 5271 Pentapetalae View MSA
122495150 5272 Eudicot View MSA
120784638 5274 Embryophyte View MSA
122826537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain