Gene : Carub.0005s1261 C. rubella v1.1
Defline:  (1 of 3) PF07714//PF13947//PF14380 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) // Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  1261
Name:  ? Carub.0005s1261 Secondary Identifier:  ? PAC:39226638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7409 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1261 0.5kb upstream 0.5kb upstream 2540 true scaffold_5: 7218439-7220978 Capsella rubella
Carub.0005s1261 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7220479-7220978 Capsella rubella
Carub.0005s1261 0.5kb downstream 0.5kb downstream 2540 true scaffold_5: 7217939-7220478 Capsella rubella
Carub.0005s1261 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7217939-7218438 Capsella rubella
Carub.0005s1261 1.0kb upstream 1.0kb upstream 3040 true scaffold_5: 7218439-7221478 Capsella rubella
Carub.0005s1261 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7220479-7221478 Capsella rubella
Carub.0005s1261 1.0kb downstream 1.0kb downstream 3040 true scaffold_5: 7217439-7220478 Capsella rubella
Carub.0005s1261 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7217439-7218438 Capsella rubella
Carub.0005s1261 2.0kb upstream 2.0kb upstream 4040 true scaffold_5: 7218439-7222478 Capsella rubella
Carub.0005s1261 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7220479-7222478 Capsella rubella
Carub.0005s1261 2.0kb downstream 2.0kb downstream 4040 true scaffold_5: 7216439-7220478 Capsella rubella
Carub.0005s1261 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7216439-7218438 Capsella rubella
Carub.0005s1261 5.0kb upstream 5.0kb upstream 7040 true scaffold_5: 7218439-7225478 Capsella rubella
Carub.0005s1261 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7220479-7225478 Capsella rubella
Carub.0005s1261 5.0kb downstream 5.0kb downstream 7040 true scaffold_5: 7213439-7220478 Capsella rubella
Carub.0005s1261 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7213439-7218438 Capsella rubella
Carub.0005s1261 10.0kb upstream 10.0kb upstream 12040 true scaffold_5: 7218439-7230478 Capsella rubella
Carub.0005s1261 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7220479-7230478 Capsella rubella
Carub.0005s1261 10.0kb downstream 10.0kb downstream 12040 true scaffold_5: 7208439-7220478 Capsella rubella
Carub.0005s1261 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7208439-7218438 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378696 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain