Gene : Carub.0005s1293 C. rubella v1.1
Defline:  (1 of 8) 2.4.1.91 - Flavonol 3-O-glucosyltransferase / UDP-glucose flavonol 3-O-glucosyltransferase Genomic Order:  1293
Name:  ? Carub.0005s1293 Secondary Identifier:  ? PAC:39226423
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5390 Capsella rubella pathologic  
Crubella PWY-7055 Capsella rubella pathologic  
Crubella PWY-7140 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1293 0.5kb upstream 0.5kb upstream 1941 true scaffold_5: 7337930-7339870 Capsella rubella
Carub.0005s1293 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7339371-7339870 Capsella rubella
Carub.0005s1293 0.5kb downstream 0.5kb downstream 1941 true scaffold_5: 7337430-7339370 Capsella rubella
Carub.0005s1293 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7337430-7337929 Capsella rubella
Carub.0005s1293 1.0kb upstream 1.0kb upstream 2441 true scaffold_5: 7337930-7340370 Capsella rubella
Carub.0005s1293 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7339371-7340370 Capsella rubella
Carub.0005s1293 1.0kb downstream 1.0kb downstream 2441 true scaffold_5: 7336930-7339370 Capsella rubella
Carub.0005s1293 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7336930-7337929 Capsella rubella
Carub.0005s1293 2.0kb upstream 2.0kb upstream 3441 true scaffold_5: 7337930-7341370 Capsella rubella
Carub.0005s1293 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7339371-7341370 Capsella rubella
Carub.0005s1293 2.0kb downstream 2.0kb downstream 3441 true scaffold_5: 7335930-7339370 Capsella rubella
Carub.0005s1293 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7335930-7337929 Capsella rubella
Carub.0005s1293 5.0kb upstream 5.0kb upstream 6441 true scaffold_5: 7337930-7344370 Capsella rubella
Carub.0005s1293 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7339371-7344370 Capsella rubella
Carub.0005s1293 5.0kb downstream 5.0kb downstream 6441 true scaffold_5: 7332930-7339370 Capsella rubella
Carub.0005s1293 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7332930-7337929 Capsella rubella
Carub.0005s1293 10.0kb upstream 10.0kb upstream 11441 true scaffold_5: 7337930-7349370 Capsella rubella
Carub.0005s1293 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7339371-7349370 Capsella rubella
Carub.0005s1293 10.0kb downstream 10.0kb downstream 11441 true scaffold_5: 7327930-7339370 Capsella rubella
Carub.0005s1293 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7327930-7337929 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369758 5261 Brassicaceae View MSA
123840844 5264 Brassicales-Malvales View MSA
124349679 5266 SBM View MSA
124238423 5268 Malvidae View MSA
124067507 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain