Gene : Carub.0005s1118 C. rubella v1.1
Defline:  (1 of 2) PTHR10782//PTHR10782:SF34 - ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN // E3 SUMO-PROTEIN LIGASE SIZ1 Genomic Order:  1118
Name:  ? Carub.0005s1118 Secondary Identifier:  ? PAC:39224835
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1118 0.5kb upstream 0.5kb upstream 6641 true scaffold_5: 6621662-6628302 Capsella rubella
Carub.0005s1118 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6627803-6628302 Capsella rubella
Carub.0005s1118 0.5kb downstream 0.5kb downstream 6641 true scaffold_5: 6621162-6627802 Capsella rubella
Carub.0005s1118 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6621162-6621661 Capsella rubella
Carub.0005s1118 1.0kb upstream 1.0kb upstream 7141 true scaffold_5: 6621662-6628802 Capsella rubella
Carub.0005s1118 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6627803-6628802 Capsella rubella
Carub.0005s1118 1.0kb downstream 1.0kb downstream 7141 true scaffold_5: 6620662-6627802 Capsella rubella
Carub.0005s1118 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6620662-6621661 Capsella rubella
Carub.0005s1118 2.0kb upstream 2.0kb upstream 8141 true scaffold_5: 6621662-6629802 Capsella rubella
Carub.0005s1118 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6627803-6629802 Capsella rubella
Carub.0005s1118 2.0kb downstream 2.0kb downstream 8141 true scaffold_5: 6619662-6627802 Capsella rubella
Carub.0005s1118 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6619662-6621661 Capsella rubella
Carub.0005s1118 5.0kb upstream 5.0kb upstream 11141 true scaffold_5: 6621662-6632802 Capsella rubella
Carub.0005s1118 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6627803-6632802 Capsella rubella
Carub.0005s1118 5.0kb downstream 5.0kb downstream 11141 true scaffold_5: 6616662-6627802 Capsella rubella
Carub.0005s1118 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6616662-6621661 Capsella rubella
Carub.0005s1118 10.0kb upstream 10.0kb upstream 16141 true scaffold_5: 6621662-6637802 Capsella rubella
Carub.0005s1118 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6627803-6637802 Capsella rubella
Carub.0005s1118 10.0kb downstream 10.0kb downstream 16141 true scaffold_5: 6611662-6627802 Capsella rubella
Carub.0005s1118 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6611662-6621661 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370600 5261 Brassicaceae View MSA
123836950 5264 Brassicales-Malvales View MSA
124338996 5266 SBM View MSA
124242030 5268 Malvidae View MSA
124063048 5270 Rosid View MSA
123737039 5271 Pentapetalae View MSA
122786497 5272 Eudicot View MSA
122046306 5273 Angiosperm View MSA
121350287 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain