Gene : Carub.0005s1113 C. rubella v1.1
Defline:  (1 of 3) K08506 - syntaxin of plants SYP7 (SYP7) Genomic Order:  1113
Name:  ? Carub.0005s1113 Secondary Identifier:  ? PAC:39226764
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1113 0.5kb upstream 0.5kb upstream 2275 true scaffold_5: 6605273-6607547 Capsella rubella
Carub.0005s1113 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6607048-6607547 Capsella rubella
Carub.0005s1113 0.5kb downstream 0.5kb downstream 2275 true scaffold_5: 6604773-6607047 Capsella rubella
Carub.0005s1113 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6604773-6605272 Capsella rubella
Carub.0005s1113 1.0kb upstream 1.0kb upstream 2775 true scaffold_5: 6605273-6608047 Capsella rubella
Carub.0005s1113 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6607048-6608047 Capsella rubella
Carub.0005s1113 1.0kb downstream 1.0kb downstream 2775 true scaffold_5: 6604273-6607047 Capsella rubella
Carub.0005s1113 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6604273-6605272 Capsella rubella
Carub.0005s1113 2.0kb upstream 2.0kb upstream 3775 true scaffold_5: 6605273-6609047 Capsella rubella
Carub.0005s1113 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6607048-6609047 Capsella rubella
Carub.0005s1113 2.0kb downstream 2.0kb downstream 3775 true scaffold_5: 6603273-6607047 Capsella rubella
Carub.0005s1113 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6603273-6605272 Capsella rubella
Carub.0005s1113 5.0kb upstream 5.0kb upstream 6775 true scaffold_5: 6605273-6612047 Capsella rubella
Carub.0005s1113 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6607048-6612047 Capsella rubella
Carub.0005s1113 5.0kb downstream 5.0kb downstream 6775 true scaffold_5: 6600273-6607047 Capsella rubella
Carub.0005s1113 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6600273-6605272 Capsella rubella
Carub.0005s1113 10.0kb upstream 10.0kb upstream 11775 true scaffold_5: 6605273-6617047 Capsella rubella
Carub.0005s1113 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6607048-6617047 Capsella rubella
Carub.0005s1113 10.0kb downstream 10.0kb downstream 11775 true scaffold_5: 6595273-6607047 Capsella rubella
Carub.0005s1113 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6595273-6605272 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782986 5273 Angiosperm View MSA
122374959 5261 Brassicaceae View MSA
123800856 5264 Brassicales-Malvales View MSA
124298220 5266 SBM View MSA
124246597 5268 Malvidae View MSA
124070118 5270 Rosid View MSA
123754224 5271 Pentapetalae View MSA
122775615 5272 Eudicot View MSA
121054482 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain