Gene : Carub.0005s1453 C. rubella v1.1
Defline:  (1 of 2) PTHR24413//PTHR24413:SF75 - FAMILY NOT NAMED // BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  1453
Name:  ? Carub.0005s1453 Secondary Identifier:  ? PAC:39225214
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1453 0.5kb upstream 0.5kb upstream 2670 true scaffold_5: 7955051-7957720 Capsella rubella
Carub.0005s1453 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7957221-7957720 Capsella rubella
Carub.0005s1453 0.5kb downstream 0.5kb downstream 2670 true scaffold_5: 7954551-7957220 Capsella rubella
Carub.0005s1453 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7954551-7955050 Capsella rubella
Carub.0005s1453 1.0kb upstream 1.0kb upstream 3170 true scaffold_5: 7955051-7958220 Capsella rubella
Carub.0005s1453 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7957221-7958220 Capsella rubella
Carub.0005s1453 1.0kb downstream 1.0kb downstream 3170 true scaffold_5: 7954051-7957220 Capsella rubella
Carub.0005s1453 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7954051-7955050 Capsella rubella
Carub.0005s1453 2.0kb upstream 2.0kb upstream 4170 true scaffold_5: 7955051-7959220 Capsella rubella
Carub.0005s1453 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7957221-7959220 Capsella rubella
Carub.0005s1453 2.0kb downstream 2.0kb downstream 4170 true scaffold_5: 7953051-7957220 Capsella rubella
Carub.0005s1453 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7953051-7955050 Capsella rubella
Carub.0005s1453 5.0kb upstream 5.0kb upstream 7170 true scaffold_5: 7955051-7962220 Capsella rubella
Carub.0005s1453 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7957221-7962220 Capsella rubella
Carub.0005s1453 5.0kb downstream 5.0kb downstream 7170 true scaffold_5: 7950051-7957220 Capsella rubella
Carub.0005s1453 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7950051-7955050 Capsella rubella
Carub.0005s1453 10.0kb upstream 10.0kb upstream 12170 true scaffold_5: 7955051-7967220 Capsella rubella
Carub.0005s1453 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7957221-7967220 Capsella rubella
Carub.0005s1453 10.0kb downstream 10.0kb downstream 12170 true scaffold_5: 7945051-7957220 Capsella rubella
Carub.0005s1453 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7945051-7955050 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372583 5261 Brassicaceae View MSA
123840259 5264 Brassicales-Malvales View MSA
124344879 5266 SBM View MSA
124237577 5268 Malvidae View MSA
124063231 5270 Rosid View MSA
123746557 5271 Pentapetalae View MSA
122796772 5272 Eudicot View MSA
122047166 5273 Angiosperm View MSA
121348143 5274 Embryophyte View MSA
123380742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain