Gene : Carub.0005s1489 C. rubella v1.1
Defline:  (1 of 2) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  1489
Name:  ? Carub.0005s1489 Secondary Identifier:  ? PAC:39225528
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5188 Capsella rubella pathologic  
Crubella PWY-5918 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1489 0.5kb upstream 0.5kb upstream 2491 true scaffold_5: 8080419-8082909 Capsella rubella
Carub.0005s1489 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8080419-8080918 Capsella rubella
Carub.0005s1489 0.5kb downstream 0.5kb downstream 2491 true scaffold_5: 8080919-8083409 Capsella rubella
Carub.0005s1489 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8082910-8083409 Capsella rubella
Carub.0005s1489 1.0kb upstream 1.0kb upstream 2991 true scaffold_5: 8079919-8082909 Capsella rubella
Carub.0005s1489 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8079919-8080918 Capsella rubella
Carub.0005s1489 1.0kb downstream 1.0kb downstream 2991 true scaffold_5: 8080919-8083909 Capsella rubella
Carub.0005s1489 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8082910-8083909 Capsella rubella
Carub.0005s1489 2.0kb upstream 2.0kb upstream 3991 true scaffold_5: 8078919-8082909 Capsella rubella
Carub.0005s1489 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8078919-8080918 Capsella rubella
Carub.0005s1489 2.0kb downstream 2.0kb downstream 3991 true scaffold_5: 8080919-8084909 Capsella rubella
Carub.0005s1489 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8082910-8084909 Capsella rubella
Carub.0005s1489 5.0kb upstream 5.0kb upstream 6991 true scaffold_5: 8075919-8082909 Capsella rubella
Carub.0005s1489 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8075919-8080918 Capsella rubella
Carub.0005s1489 5.0kb downstream 5.0kb downstream 6991 true scaffold_5: 8080919-8087909 Capsella rubella
Carub.0005s1489 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8082910-8087909 Capsella rubella
Carub.0005s1489 10.0kb upstream 10.0kb upstream 11991 true scaffold_5: 8070919-8082909 Capsella rubella
Carub.0005s1489 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8070919-8080918 Capsella rubella
Carub.0005s1489 10.0kb downstream 10.0kb downstream 11991 true scaffold_5: 8080919-8092909 Capsella rubella
Carub.0005s1489 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8082910-8092909 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377192 5261 Brassicaceae View MSA
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain