Gene : Carub.0005s1537 C. rubella v1.1
Defline:  (1 of 2) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  1537
Name:  ? Carub.0005s1537 Secondary Identifier:  ? PAC:39224711
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1537 0.5kb upstream 0.5kb upstream 4373 true scaffold_5: 8258701-8263073 Capsella rubella
Carub.0005s1537 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8262574-8263073 Capsella rubella
Carub.0005s1537 0.5kb downstream 0.5kb downstream 4373 true scaffold_5: 8258201-8262573 Capsella rubella
Carub.0005s1537 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8258201-8258700 Capsella rubella
Carub.0005s1537 1.0kb upstream 1.0kb upstream 4873 true scaffold_5: 8258701-8263573 Capsella rubella
Carub.0005s1537 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8262574-8263573 Capsella rubella
Carub.0005s1537 1.0kb downstream 1.0kb downstream 4873 true scaffold_5: 8257701-8262573 Capsella rubella
Carub.0005s1537 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8257701-8258700 Capsella rubella
Carub.0005s1537 2.0kb upstream 2.0kb upstream 5873 true scaffold_5: 8258701-8264573 Capsella rubella
Carub.0005s1537 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8262574-8264573 Capsella rubella
Carub.0005s1537 2.0kb downstream 2.0kb downstream 5873 true scaffold_5: 8256701-8262573 Capsella rubella
Carub.0005s1537 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8256701-8258700 Capsella rubella
Carub.0005s1537 5.0kb upstream 5.0kb upstream 8873 true scaffold_5: 8258701-8267573 Capsella rubella
Carub.0005s1537 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8262574-8267573 Capsella rubella
Carub.0005s1537 5.0kb downstream 5.0kb downstream 8873 true scaffold_5: 8253701-8262573 Capsella rubella
Carub.0005s1537 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8253701-8258700 Capsella rubella
Carub.0005s1537 10.0kb upstream 10.0kb upstream 13873 true scaffold_5: 8258701-8272573 Capsella rubella
Carub.0005s1537 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8262574-8272573 Capsella rubella
Carub.0005s1537 10.0kb downstream 10.0kb downstream 13873 true scaffold_5: 8248701-8262573 Capsella rubella
Carub.0005s1537 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8248701-8258700 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378388 5261 Brassicaceae View MSA
123836782 5264 Brassicales-Malvales View MSA
124341056 5266 SBM View MSA
124252927 5268 Malvidae View MSA
124066138 5270 Rosid View MSA
123741710 5271 Pentapetalae View MSA
122789997 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain