Gene : Carub.0005s1558 C. rubella v1.1
Defline:  (1 of 8) 3.4.22.33 - Fruit bromelain Genomic Order:  1558
Name:  ? Carub.0005s1558 Secondary Identifier:  ? PAC:39225188
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1558 0.5kb upstream 0.5kb upstream 1821 true scaffold_5: 8332129-8333949 Capsella rubella
Carub.0005s1558 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8333450-8333949 Capsella rubella
Carub.0005s1558 0.5kb downstream 0.5kb downstream 1821 true scaffold_5: 8331629-8333449 Capsella rubella
Carub.0005s1558 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8331629-8332128 Capsella rubella
Carub.0005s1558 1.0kb upstream 1.0kb upstream 2321 true scaffold_5: 8332129-8334449 Capsella rubella
Carub.0005s1558 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8333450-8334449 Capsella rubella
Carub.0005s1558 1.0kb downstream 1.0kb downstream 2321 true scaffold_5: 8331129-8333449 Capsella rubella
Carub.0005s1558 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8331129-8332128 Capsella rubella
Carub.0005s1558 2.0kb upstream 2.0kb upstream 3321 true scaffold_5: 8332129-8335449 Capsella rubella
Carub.0005s1558 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8333450-8335449 Capsella rubella
Carub.0005s1558 2.0kb downstream 2.0kb downstream 3321 true scaffold_5: 8330129-8333449 Capsella rubella
Carub.0005s1558 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8330129-8332128 Capsella rubella
Carub.0005s1558 5.0kb upstream 5.0kb upstream 6321 true scaffold_5: 8332129-8338449 Capsella rubella
Carub.0005s1558 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8333450-8338449 Capsella rubella
Carub.0005s1558 5.0kb downstream 5.0kb downstream 6321 true scaffold_5: 8327129-8333449 Capsella rubella
Carub.0005s1558 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8327129-8332128 Capsella rubella
Carub.0005s1558 10.0kb upstream 10.0kb upstream 11321 true scaffold_5: 8332129-8343449 Capsella rubella
Carub.0005s1558 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8333450-8343449 Capsella rubella
Carub.0005s1558 10.0kb downstream 10.0kb downstream 11321 true scaffold_5: 8322129-8333449 Capsella rubella
Carub.0005s1558 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8322129-8332128 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381678 5261 Brassicaceae View MSA
123841573 5264 Brassicales-Malvales View MSA
124341900 5266 SBM View MSA
124254446 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain