Gene : Carub.0005s1389 C. rubella v1.1
Defline:  (1 of 5) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED Genomic Order:  1389
Name:  ? Carub.0005s1389 Secondary Identifier:  ? PAC:39224900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1389 0.5kb upstream 0.5kb upstream 5268 true scaffold_5: 7675802-7681069 Capsella rubella
Carub.0005s1389 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7675802-7676301 Capsella rubella
Carub.0005s1389 0.5kb downstream 0.5kb downstream 5268 true scaffold_5: 7676302-7681569 Capsella rubella
Carub.0005s1389 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7681070-7681569 Capsella rubella
Carub.0005s1389 1.0kb upstream 1.0kb upstream 5768 true scaffold_5: 7675302-7681069 Capsella rubella
Carub.0005s1389 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7675302-7676301 Capsella rubella
Carub.0005s1389 1.0kb downstream 1.0kb downstream 5768 true scaffold_5: 7676302-7682069 Capsella rubella
Carub.0005s1389 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7681070-7682069 Capsella rubella
Carub.0005s1389 2.0kb upstream 2.0kb upstream 6768 true scaffold_5: 7674302-7681069 Capsella rubella
Carub.0005s1389 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7674302-7676301 Capsella rubella
Carub.0005s1389 2.0kb downstream 2.0kb downstream 6768 true scaffold_5: 7676302-7683069 Capsella rubella
Carub.0005s1389 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7681070-7683069 Capsella rubella
Carub.0005s1389 5.0kb upstream 5.0kb upstream 9768 true scaffold_5: 7671302-7681069 Capsella rubella
Carub.0005s1389 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7671302-7676301 Capsella rubella
Carub.0005s1389 5.0kb downstream 5.0kb downstream 9768 true scaffold_5: 7676302-7686069 Capsella rubella
Carub.0005s1389 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7681070-7686069 Capsella rubella
Carub.0005s1389 10.0kb upstream 10.0kb upstream 14768 true scaffold_5: 7666302-7681069 Capsella rubella
Carub.0005s1389 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7666302-7676301 Capsella rubella
Carub.0005s1389 10.0kb downstream 10.0kb downstream 14768 true scaffold_5: 7676302-7691069 Capsella rubella
Carub.0005s1389 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7681070-7691069 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
122367601 5261 Brassicaceae View MSA
123834261 5264 Brassicales-Malvales View MSA
124339149 5266 SBM View MSA
124239829 5268 Malvidae View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain