Gene : Carub.0005s1672 C. rubella v1.1
Defline:  (1 of 1) KOG0265//KOG0279//KOG0313//KOG0315//KOG0645 - U5 snRNP-specific protein-like factor and related proteins // G protein beta subunit-like protein // Microtubule binding protein YTM1 (contains WD40 repeats) // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein Genomic Order:  1672
Name:  ? Carub.0005s1672 Secondary Identifier:  ? PAC:39223853
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1672 0.5kb upstream 0.5kb upstream 1907 true scaffold_5: 8788940-8790846 Capsella rubella
Carub.0005s1672 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8788940-8789439 Capsella rubella
Carub.0005s1672 0.5kb downstream 0.5kb downstream 1907 true scaffold_5: 8789440-8791346 Capsella rubella
Carub.0005s1672 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8790847-8791346 Capsella rubella
Carub.0005s1672 1.0kb upstream 1.0kb upstream 2407 true scaffold_5: 8788440-8790846 Capsella rubella
Carub.0005s1672 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8788440-8789439 Capsella rubella
Carub.0005s1672 1.0kb downstream 1.0kb downstream 2407 true scaffold_5: 8789440-8791846 Capsella rubella
Carub.0005s1672 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8790847-8791846 Capsella rubella
Carub.0005s1672 2.0kb upstream 2.0kb upstream 3407 true scaffold_5: 8787440-8790846 Capsella rubella
Carub.0005s1672 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8787440-8789439 Capsella rubella
Carub.0005s1672 2.0kb downstream 2.0kb downstream 3407 true scaffold_5: 8789440-8792846 Capsella rubella
Carub.0005s1672 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8790847-8792846 Capsella rubella
Carub.0005s1672 5.0kb upstream 5.0kb upstream 6407 true scaffold_5: 8784440-8790846 Capsella rubella
Carub.0005s1672 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8784440-8789439 Capsella rubella
Carub.0005s1672 5.0kb downstream 5.0kb downstream 6407 true scaffold_5: 8789440-8795846 Capsella rubella
Carub.0005s1672 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8790847-8795846 Capsella rubella
Carub.0005s1672 10.0kb upstream 10.0kb upstream 11407 true scaffold_5: 8779440-8790846 Capsella rubella
Carub.0005s1672 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8779440-8789439 Capsella rubella
Carub.0005s1672 10.0kb downstream 10.0kb downstream 11407 true scaffold_5: 8789440-8800846 Capsella rubella
Carub.0005s1672 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8790847-8800846 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367564 5261 Brassicaceae View MSA
123839384 5264 Brassicales-Malvales View MSA
124346237 5266 SBM View MSA
124242603 5268 Malvidae View MSA
124072112 5270 Rosid View MSA
123752905 5271 Pentapetalae View MSA
122794540 5272 Eudicot View MSA
122049001 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain