Protein Family : WD-40 repeat family protein, putative, expressed 123428719

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  776

776 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
65096 (1 of 1) KOG0271 - Notchless-like WD40 repeat-containing protein S. moellendorffii v1.0 1164   scaffold_4: 1972353-1973516
126282 (1 of 2) KOG0279//KOG0645 - G protein beta subunit-like protein // WD40 repeat protein S. moellendorffii v1.0 1371   scaffold_82: 328462-329832
29736.t000107 (1 of 2) PTHR22844//PTHR22844:SF159 - F-BOX AND WD40 DOMAIN PROTEIN // F3I6.5 PROTEIN R. communis v0.1 1296   29736: 737505-738800
29851.t000118 (1 of 2) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1347   29851: 729521-730867
29929.t000290 (1 of 1) KOG0279//KOG0315 - G protein beta subunit-like protein // G-protein beta subunit-like protein (contains WD40 repeats) R. communis v0.1 1462   29929: 1659845-1661306
30131.t000400 (1 of 1) PTHR22844//PTHR22844:SF223 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1448   30131: 2459273-2460720
30147.t000281 (1 of 2) PTHR22844//PTHR22844:SF159 - F-BOX AND WD40 DOMAIN PROTEIN // F3I6.5 PROTEIN R. communis v0.1 1206   30147: 3960923-3962128
30147.t000591 (1 of 1) PF00400//PF00642 - WD domain, G-beta repeat (WD40) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) R. communis v0.1 3673   30147: 435674-439346
30170.t000381 (1 of 2) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1413   30170: 2040042-2041454
30174.t000347 (1 of 1) KOG0278//KOG0279 - Serine/threonine kinase receptor-associated protein // G protein beta subunit-like protein R. communis v0.1 2837   30174: 1189846-1192682
30174.t000322 (1 of 1) KOG0278//KOG0279//KOG0296 - Serine/threonine kinase receptor-associated protein // G protein beta subunit-like protein // Angio-associated migratory cell protein (contains WD40 repeats) R. communis v0.1 3443   30174: 1045424-1048866
29676.t000073 (1 of 1) PTHR22844//PTHR22844:SF211 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1543   29676: 428800-430342
Cucsa.366530 (1 of 4) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN C. sativus v1.0 1334   scaffold03625: 113401-114734
Cucsa.342030 (1 of 4) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN C. sativus v1.0 1614   scaffold03356: 4442378-4443991
Cucsa.340320 (1 of 1) PTHR22844:SF178 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 48-RELATED C. sativus v1.0 6205   scaffold03356: 2793885-2800089
Cucsa.098200 (1 of 1) PTHR22844:SF159 - F3I6.5 PROTEIN C. sativus v1.0 2187   scaffold00923: 280522-282708
Cucsa.038860 (1 of 1) PTHR22844//PTHR22844:SF213 - F-BOX AND WD40 DOMAIN PROTEIN C. sativus v1.0 2157   scaffold00508: 149518-151674
Cucsa.220240 (1 of 4) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN C. sativus v1.0 1404   scaffold01658: 1729014-1730417
Cucsa.286790 (1 of 2) PTHR22844:SF199 - F21J9.19 C. sativus v1.0 1338   scaffold02653: 2766320-2767657
Cucsa.335480 (1 of 1) PTHR22844//PTHR22844:SF223 - F-BOX AND WD40 DOMAIN PROTEIN C. sativus v1.0 1174   scaffold03324: 40513-41686
orange1.1g047728m.g (1 of 1) PTHR22844//PTHR22844:SF211 - F-BOX AND WD40 DOMAIN PROTEIN C. sinensis v1.1 1425   scaffold00006: 2170939-2172363
orange1.1g044557m.g (1 of 2) PTHR22844:SF159 - F3I6.5 PROTEIN C. sinensis v1.1 1089   scaffold00020: 1418538-1419626
orange1.1g013881m.g (1 of 1) PF00400//PF00642 - WD domain, G-beta repeat (WD40) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sinensis v1.1 4961   scaffold00062: 450641-455601
orange1.1g011711m.g (1 of 4) PTHR22844:SF178 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 48-RELATED C. sinensis v1.1 3687   scaffold00218: 12253-15939
orange1.1g016134m.g (1 of 4) PTHR22844:SF178 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 48-RELATED C. sinensis v1.1 2562   scaffold00348: 86379-88940
orange1.1g012007m.g (1 of 3) PTHR22844//PTHR22844:SF145 - F-BOX AND WD40 DOMAIN PROTEIN C. sinensis v1.1 1889   scaffold00184: 64741-66629
orange1.1g018591m.g (1 of 1) PTHR22844//PTHR22844:SF223 - F-BOX AND WD40 DOMAIN PROTEIN C. sinensis v1.1 1154   scaffold00003: 3807256-3808409
orange1.1g041325m.g (1 of 2) PTHR22844:SF159 - F3I6.5 PROTEIN C. sinensis v1.1 1350   scaffold00003: 2280208-2281557
orange1.1g013717m.g (1 of 1) KOG0265//KOG0295//KOG0315 - U5 snRNP-specific protein-like factor and related proteins // WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) C. sinensis v1.1 1347   scaffold00003: 1121293-1122639
orange1.1g047325m.g (1 of 1) KOG0279//KOG0296//KOG0645 - G protein beta subunit-like protein // Angio-associated migratory cell protein (contains WD40 repeats) // WD40 repeat protein C. sinensis v1.1 1625   scaffold00002: 2540374-2541998

776 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
65096 S. moellendorffii v1.0 123428719 WD-40 repeat family protein, putative, expressed 2 5275 Viridiplantae
126282 S. moellendorffii v1.0 123428719 WD-40 repeat family protein, putative, expressed 2 5275 Viridiplantae
29929.m004787 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30131.m007249 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30147.m014010 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30147.m014320 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
29736.m002111 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30174.m008950 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30174.m008925 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
29676.m001682 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
30170.m013969 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
29851.m002476 R. communis v0.1 123428719 WD-40 repeat family protein, putative, expressed 10 5275 Viridiplantae
Cucsa.098200.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.366530.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.342030.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.340320.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.038860.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.220240.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.286790.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
Cucsa.335480.1 C. sativus v1.0 123428719 WD-40 repeat family protein, putative, expressed 8 5275 Viridiplantae
orange1.1g013717m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g012007m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g047325m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g038537m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g013881m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g016134m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g011711m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g047728m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g044557m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae
orange1.1g018591m C. sinensis v1.1 123428719 WD-40 repeat family protein, putative, expressed 11 5275 Viridiplantae