Gene : Carub.0005s1727 C. rubella v1.1
Defline:  (1 of 3) K01247 - DNA-3-methyladenine glycosylase II (alkA) Genomic Order:  1727
Name:  ? Carub.0005s1727 Secondary Identifier:  ? PAC:39224338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1727 0.5kb upstream 0.5kb upstream 2571 true scaffold_5: 9019877-9022447 Capsella rubella
Carub.0005s1727 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9019877-9020376 Capsella rubella
Carub.0005s1727 0.5kb downstream 0.5kb downstream 2571 true scaffold_5: 9020377-9022947 Capsella rubella
Carub.0005s1727 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9022448-9022947 Capsella rubella
Carub.0005s1727 1.0kb upstream 1.0kb upstream 3071 true scaffold_5: 9019377-9022447 Capsella rubella
Carub.0005s1727 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9019377-9020376 Capsella rubella
Carub.0005s1727 1.0kb downstream 1.0kb downstream 3071 true scaffold_5: 9020377-9023447 Capsella rubella
Carub.0005s1727 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9022448-9023447 Capsella rubella
Carub.0005s1727 2.0kb upstream 2.0kb upstream 4071 true scaffold_5: 9018377-9022447 Capsella rubella
Carub.0005s1727 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9018377-9020376 Capsella rubella
Carub.0005s1727 2.0kb downstream 2.0kb downstream 4071 true scaffold_5: 9020377-9024447 Capsella rubella
Carub.0005s1727 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9022448-9024447 Capsella rubella
Carub.0005s1727 5.0kb upstream 5.0kb upstream 7071 true scaffold_5: 9015377-9022447 Capsella rubella
Carub.0005s1727 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9015377-9020376 Capsella rubella
Carub.0005s1727 5.0kb downstream 5.0kb downstream 7071 true scaffold_5: 9020377-9027447 Capsella rubella
Carub.0005s1727 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9022448-9027447 Capsella rubella
Carub.0005s1727 10.0kb upstream 10.0kb upstream 12071 true scaffold_5: 9010377-9022447 Capsella rubella
Carub.0005s1727 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9010377-9020376 Capsella rubella
Carub.0005s1727 10.0kb downstream 10.0kb downstream 12071 true scaffold_5: 9020377-9032447 Capsella rubella
Carub.0005s1727 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9022448-9032447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027501 5273 Angiosperm View MSA
122362456 5261 Brassicaceae View MSA
123798368 5264 Brassicales-Malvales View MSA
124296013 5266 SBM View MSA
124246391 5268 Malvidae View MSA
124050187 5270 Rosid View MSA
123646941 5271 Pentapetalae View MSA
122680964 5272 Eudicot View MSA
121350563 5274 Embryophyte View MSA
123425595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain