Gene : Carub.0005s1583 C. rubella v1.1
Defline:  (1 of 1) PTHR23079//PTHR23079:SF1 - RNA-DEPENDENT RNA POLYMERASE // PROTEIN RRF-3 Genomic Order:  1583
Name:  ? Carub.0005s1583 Secondary Identifier:  ? PAC:39224332
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1583 0.5kb upstream 0.5kb upstream 5135 true scaffold_5: 8426286-8431420 Capsella rubella
Carub.0005s1583 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8430921-8431420 Capsella rubella
Carub.0005s1583 0.5kb downstream 0.5kb downstream 5135 true scaffold_5: 8425786-8430920 Capsella rubella
Carub.0005s1583 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8425786-8426285 Capsella rubella
Carub.0005s1583 1.0kb upstream 1.0kb upstream 5635 true scaffold_5: 8426286-8431920 Capsella rubella
Carub.0005s1583 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8430921-8431920 Capsella rubella
Carub.0005s1583 1.0kb downstream 1.0kb downstream 5635 true scaffold_5: 8425286-8430920 Capsella rubella
Carub.0005s1583 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8425286-8426285 Capsella rubella
Carub.0005s1583 2.0kb upstream 2.0kb upstream 6635 true scaffold_5: 8426286-8432920 Capsella rubella
Carub.0005s1583 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8430921-8432920 Capsella rubella
Carub.0005s1583 2.0kb downstream 2.0kb downstream 6635 true scaffold_5: 8424286-8430920 Capsella rubella
Carub.0005s1583 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8424286-8426285 Capsella rubella
Carub.0005s1583 5.0kb upstream 5.0kb upstream 9635 true scaffold_5: 8426286-8435920 Capsella rubella
Carub.0005s1583 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8430921-8435920 Capsella rubella
Carub.0005s1583 5.0kb downstream 5.0kb downstream 9635 true scaffold_5: 8421286-8430920 Capsella rubella
Carub.0005s1583 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8421286-8426285 Capsella rubella
Carub.0005s1583 10.0kb upstream 10.0kb upstream 14635 true scaffold_5: 8426286-8440920 Capsella rubella
Carub.0005s1583 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8430921-8440920 Capsella rubella
Carub.0005s1583 10.0kb downstream 10.0kb downstream 14635 true scaffold_5: 8416286-8430920 Capsella rubella
Carub.0005s1583 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8416286-8426285 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374170 5261 Brassicaceae View MSA
123838821 5264 Brassicales-Malvales View MSA
124322501 5266 SBM View MSA
124236891 5268 Malvidae View MSA
124063849 5270 Rosid View MSA
123737046 5271 Pentapetalae View MSA
122789317 5272 Eudicot View MSA
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain