Protein Family : RNA-dependent RNA polymerase 1 123428546

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  414

414 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
413790 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED S. moellendorffii v1.0 3733   scaffold_21: 1716660-1720392
150191 (1 of 4) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) S. moellendorffii v1.0 2910   scaffold_26: 321860-324769
29848.t000189 (1 of 1) PTHR23079//PTHR23079:SF1 - RNA-DEPENDENT RNA POLYMERASE // PROTEIN RRF-3 R. communis v0.1 4135   29848: 1060847-1064981
30147.t000252 (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 R. communis v0.1 4860   30147: 3784278-3789137
Cucsa.012120 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 2248   scaffold00154: 1575777-1578024
Cucsa.143700 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 5962   scaffold01080: 27081-33042
Cucsa.143710 (1 of 1) PF05183//PF14259 - RNA dependent RNA polymerase (RdRP) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) C. sativus v1.0 4071   scaffold01080: 35277-39347
Cucsa.162430 (1 of 1) PTHR23079:SF1 - PROTEIN RRF-3 C. sativus v1.0 3813   scaffold01144: 2067074-2070886
Cucsa.197050 (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 C. sativus v1.0 4483   scaffold01357: 582623-587105
Cucsa.280130 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 2335   scaffold02633: 30568-32902
orange1.1g001771m.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. sinensis v1.1 11526   scaffold00027: 638984-650509
AT4G11130 (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 A. thaliana TAIR10 RDR2 3919   Chr4: 6780522-6784440
AT3G49500 (1 of 1) PTHR23079//PTHR23079:SF1 - RNA-DEPENDENT RNA POLYMERASE // PROTEIN RRF-3 A. thaliana TAIR10 RDR6 4464   Chr3: 18349161-18353624
AT1G14790 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 A. thaliana TAIR10 RDR1 4072   Chr1: 5093961-5098032
AT2G19930 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 5102   Chr2: 8607340-8612441
AT2G19920 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4666   Chr2: 8602222-8606887
AT2G19910 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4938   Chr2: 8595820-8600757
Thhalv10001896m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4743   scaffold_12: 10345298-10350040
Thhalv10001897m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4986   scaffold_12: 10353846-10358831
Thhalv10010107m.g (1 of 1) PTHR23079:SF1 - PROTEIN RRF-3 E. salsugineum v1.0 3337   scaffold_16: 2934624-2937960
Thhalv10028370m.g (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 E. salsugineum v1.0 4299   scaffold_3: 4972951-4977249
Thhalv10006629m.g (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 E. salsugineum v1.0 3522   scaffold_5: 10359559-10363080
Ciclev10007331m.g (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. clementina v1.0 11407   scaffold_1: 7390098-7401504
Lus10042134.g (1 of 2) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 L. usitatissimum v1.0 4745   scaffold123: 840496-845240
Lus10002361.g (1 of 2) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 L. usitatissimum v1.0 2073   scaffold2788: 14615-16687
Lus10019164.g (1 of 4) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 L. usitatissimum v1.0 3556   scaffold30: 481150-484705
Lus10002910.g (1 of 3) PTHR23079:SF1 - PROTEIN RRF-3 L. usitatissimum v1.0 2630   scaffold3059: 53859-56488
Lus10034262.g (1 of 4) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 L. usitatissimum v1.0 1370   scaffold310: 304763-306132
Lus10012965.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED L. usitatissimum v1.0 8268   scaffold434: 316578-324845
Lus10002017.g (1 of 3) PTHR23079:SF1 - PROTEIN RRF-3 L. usitatissimum v1.0 3739   scaffold996: 20322-24060

414 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
413790 S. moellendorffii v1.0 123428546 RNA-dependent RNA polymerase 1 2 5275 Viridiplantae
150191 S. moellendorffii v1.0 123428546 RNA-dependent RNA polymerase 1 2 5275 Viridiplantae
29848.m004633 R. communis v0.1 123428546 RNA-dependent RNA polymerase 1 2 5275 Viridiplantae
30147.m013981 R. communis v0.1 123428546 RNA-dependent RNA polymerase 1 2 5275 Viridiplantae
Cucsa.280130.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Cucsa.012120.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Cucsa.143700.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Cucsa.143710.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Cucsa.162430.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Cucsa.197050.1 C. sativus v1.0 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
orange1.1g001771m C. sinensis v1.1 123428546 RNA-dependent RNA polymerase 1 1 5275 Viridiplantae
AT2G19910.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
AT4G11130.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
AT3G49500.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
AT1G14790.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
AT2G19930.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
AT2G19920.1 A. thaliana TAIR10 123428546 RNA-dependent RNA polymerase 1 6 5275 Viridiplantae
Thhalv10001896m E. salsugineum v1.0 123428546 RNA-dependent RNA polymerase 1 5 5275 Viridiplantae
Thhalv10001897m E. salsugineum v1.0 123428546 RNA-dependent RNA polymerase 1 5 5275 Viridiplantae
Thhalv10010107m E. salsugineum v1.0 123428546 RNA-dependent RNA polymerase 1 5 5275 Viridiplantae
Thhalv10028370m E. salsugineum v1.0 123428546 RNA-dependent RNA polymerase 1 5 5275 Viridiplantae
Thhalv10006629m E. salsugineum v1.0 123428546 RNA-dependent RNA polymerase 1 5 5275 Viridiplantae
Ciclev10007331m C. clementina v1.0 123428546 RNA-dependent RNA polymerase 1 1 5275 Viridiplantae
Lus10042134 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10002361 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10019164 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10002910 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10034262 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10002017 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae
Lus10012965 L. usitatissimum v1.0 123428546 RNA-dependent RNA polymerase 1 7 5275 Viridiplantae