Gene : Carub.0005s1955 C. rubella v1.1
Defline:  (1 of 4) PTHR23421:SF49 - BETA-GALACTOSIDASE 15-RELATED Genomic Order:  1955
Name:  ? Carub.0005s1955 Secondary Identifier:  ? PAC:39226188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1955 0.5kb upstream 0.5kb upstream 1074 true scaffold_5: 9809597-9810670 Capsella rubella
Carub.0005s1955 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9809597-9810096 Capsella rubella
Carub.0005s1955 0.5kb downstream 0.5kb downstream 1074 true scaffold_5: 9810097-9811170 Capsella rubella
Carub.0005s1955 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9810671-9811170 Capsella rubella
Carub.0005s1955 1.0kb upstream 1.0kb upstream 1574 true scaffold_5: 9809097-9810670 Capsella rubella
Carub.0005s1955 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9809097-9810096 Capsella rubella
Carub.0005s1955 1.0kb downstream 1.0kb downstream 1574 true scaffold_5: 9810097-9811670 Capsella rubella
Carub.0005s1955 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9810671-9811670 Capsella rubella
Carub.0005s1955 2.0kb upstream 2.0kb upstream 2574 true scaffold_5: 9808097-9810670 Capsella rubella
Carub.0005s1955 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9808097-9810096 Capsella rubella
Carub.0005s1955 2.0kb downstream 2.0kb downstream 2574 true scaffold_5: 9810097-9812670 Capsella rubella
Carub.0005s1955 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9810671-9812670 Capsella rubella
Carub.0005s1955 5.0kb upstream 5.0kb upstream 5574 true scaffold_5: 9805097-9810670 Capsella rubella
Carub.0005s1955 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9805097-9810096 Capsella rubella
Carub.0005s1955 5.0kb downstream 5.0kb downstream 5574 true scaffold_5: 9810097-9815670 Capsella rubella
Carub.0005s1955 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9810671-9815670 Capsella rubella
Carub.0005s1955 10.0kb upstream 10.0kb upstream 10574 true scaffold_5: 9800097-9810670 Capsella rubella
Carub.0005s1955 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9800097-9810096 Capsella rubella
Carub.0005s1955 10.0kb downstream 10.0kb downstream 10574 true scaffold_5: 9810097-9820670 Capsella rubella
Carub.0005s1955 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9810671-9820670 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379381 5261 Brassicaceae View MSA
123802237 5264 Brassicales-Malvales View MSA
124299449 5266 SBM View MSA
124251058 5268 Malvidae View MSA
124070420 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain