Gene : Carub.0005s1948 C. rubella v1.1
Defline:  (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 Genomic Order:  1948
Name:  ? Carub.0005s1948 Secondary Identifier:  ? PAC:39223746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1948 0.5kb upstream 0.5kb upstream 2483 true scaffold_5: 9783530-9786012 Capsella rubella
Carub.0005s1948 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9783530-9784029 Capsella rubella
Carub.0005s1948 0.5kb downstream 0.5kb downstream 2483 true scaffold_5: 9784030-9786512 Capsella rubella
Carub.0005s1948 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9786013-9786512 Capsella rubella
Carub.0005s1948 1.0kb upstream 1.0kb upstream 2983 true scaffold_5: 9783030-9786012 Capsella rubella
Carub.0005s1948 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9783030-9784029 Capsella rubella
Carub.0005s1948 1.0kb downstream 1.0kb downstream 2983 true scaffold_5: 9784030-9787012 Capsella rubella
Carub.0005s1948 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9786013-9787012 Capsella rubella
Carub.0005s1948 2.0kb upstream 2.0kb upstream 3983 true scaffold_5: 9782030-9786012 Capsella rubella
Carub.0005s1948 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9782030-9784029 Capsella rubella
Carub.0005s1948 2.0kb downstream 2.0kb downstream 3983 true scaffold_5: 9784030-9788012 Capsella rubella
Carub.0005s1948 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9786013-9788012 Capsella rubella
Carub.0005s1948 5.0kb upstream 5.0kb upstream 6983 true scaffold_5: 9779030-9786012 Capsella rubella
Carub.0005s1948 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9779030-9784029 Capsella rubella
Carub.0005s1948 5.0kb downstream 5.0kb downstream 6983 true scaffold_5: 9784030-9791012 Capsella rubella
Carub.0005s1948 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9786013-9791012 Capsella rubella
Carub.0005s1948 10.0kb upstream 10.0kb upstream 11983 true scaffold_5: 9774030-9786012 Capsella rubella
Carub.0005s1948 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9774030-9784029 Capsella rubella
Carub.0005s1948 10.0kb downstream 10.0kb downstream 11983 true scaffold_5: 9784030-9796012 Capsella rubella
Carub.0005s1948 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9786013-9796012 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375737 5261 Brassicaceae View MSA
123834101 5264 Brassicales-Malvales View MSA
124346427 5266 SBM View MSA
124244625 5268 Malvidae View MSA
124072958 5270 Rosid View MSA
123741560 5271 Pentapetalae View MSA
122786150 5272 Eudicot View MSA
122046764 5273 Angiosperm View MSA
121351034 5274 Embryophyte View MSA
123381984 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain