Protein Family : CCCH-type zinc fingerfamily protein with RNA-binding domain 123741560

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  77

77 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29223.t000001 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 R. communis v0.1 3249   29223: 4425-7673
27613.t000038 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 R. communis v0.1 3999   27613: 239363-243361
Cucsa.042290 (1 of 1) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. sativus v1.0 2915   scaffold00540: 746770-749684
orange1.1g008439m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. sinensis v1.1 4616   scaffold00049: 582125-586740
orange1.1g007997m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. sinensis v1.1 3731   scaffold00077: 206678-210408
AT2G05160 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 A. thaliana TAIR10 3353   Chr2: 1858543-1861895
Thhalv10011072m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 E. salsugineum v1.0 2159   scaffold_16: 1292522-1294680
Thhalv10002476m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 E. salsugineum v1.0 2392   scaffold_4: 3309702-3312093
Ciclev10007876m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. clementina v1.0 4607   scaffold_1: 23135170-23139776
Ciclev10014902m.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. clementina v1.0 3726   scaffold_2: 23924259-23927984
Lus10006379.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 L. usitatissimum v1.0 2273   scaffold1603: 116026-118298
Lus10012333.g (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 L. usitatissimum v1.0 2311   scaffold572: 193235-195545
Gorai.002G096600 (1 of 3) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 G. raimondii v2.1 3791   Chr02: 12200316-12204106
Gorai.007G166600 (1 of 3) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 G. raimondii v2.1 4723   Chr07: 14788202-14792924
Thecc1EG002338 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 T. cacao v1.1 6591   scaffold_1: 13259484-13266074
Thecc1EG030730 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 T. cacao v1.1 4383   scaffold_7: 1103537-1107919
Migut.M00029 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 M. guttatus v2.0 3260   scaffold_13: 179195-182454
Migut.M01674 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 M. guttatus v2.0 3766   scaffold_13: 19591609-19595374
Cagra.0612s0020 (1 of 1) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 C. grandiflora v1.1 1954   Scaffold612: 78197-80150
Glyma.08G326000 (1 of 4) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 G. max Wm82.a2.v1 5101   Chr08: 44420374-44425474
Glyma.14G015700 (1 of 1) PF00076//PF00642//PF12872 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // OST-HTH/LOTUS domain (OST-HTH) G. max Wm82.a2.v1 7123   Chr14: 1130025-1137147
Glyma.18G081000 (1 of 4) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 G. max Wm82.a2.v1 4434   Chr18: 7802531-7806964
Glyma.02G298000 (1 of 4) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 G. max Wm82.a2.v1 6592   Chr02: 47531840-47538431
Brara.G00686 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 B. rapa FPsc v1.3 1945   A07: 8763350-8765294
Brara.C04037 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 B. rapa FPsc v1.3 2991   A03: 21061623-21064613
Bostr.19424s0008 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 B. stricta v1.2 3385   Scaffold19424: 70325-73709
Medtr5g094700 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 M. truncatula Mt4.0v1 5972   chr5: 41375614-41381585
SapurV1A.0054s0260 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 S. purpurea v1.0 5041   Scaffold0054: 253370-258410
SapurV1A.0014s0640 (1 of 2) PTHR24009//PTHR24009:SF4 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 S. purpurea v1.0 5282   chr02: 19846402-19851683
Eucgr.F00620 (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 E. grandis v2.0 4075   Chr06: 9136699-9140773

77 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29223.m000023 R. communis v0.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
orange1.1g007997m C. sinensis v1.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Lus10012333 L. usitatissimum v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Gorai.002G096600.1 G. raimondii v2.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Thecc1EG030730t2 T. cacao v1.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Migut.M01674.1.p M. guttatus v2.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Glyma.02G298000.1.p G. max Wm82.a2.v1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 4 5271 Pentapetalae
Glyma.14G015700.1.p G. max Wm82.a2.v1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 4 5271 Pentapetalae
Glyma.08G326000.1.p G. max Wm82.a2.v1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 4 5271 Pentapetalae
Glyma.18G081000.1.p G. max Wm82.a2.v1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 4 5271 Pentapetalae
Bostr.19424s0008.1.p B. stricta v1.2 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 1 5271 Pentapetalae
Prupe.3G200500.1.p P. persica v2.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Manes.12G065300.1.p M. esculenta v6.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 4 5271 Pentapetalae
Kalax.0093s0030.1.p K. laxiflora v1.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
DCAR_019233 D. carota v2.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
DCAR_012905 D. carota v2.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
AUR62017061-RA C. quinoa v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
AUR62015061-RA C. quinoa v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
AUR62040656-RA C. quinoa v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
Potri.002G221100.2.p P. trichocarpa v3.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
Potri.002G217600.4.p P. trichocarpa v3.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
PGSC0003DMP400010869 S. tuberosum v4.03 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
PGSC0003DMP400038397 S. tuberosum v4.03 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Oeu019607.1 O. europaea v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
VIT_212s0057g00570.1 V. vinifera v2.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Lsat_1_v5_gn_7_95520.1 L. sativa V8 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
Lsat_1_v5_gn_9_104521.1 L. sativa V8 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 3 5271 Pentapetalae
Carub.0003s2667.1.p C. rubella v1.1 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae
Ca_09701 C. arietinum v1.0 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 1 5271 Pentapetalae
HanXRQChr11g0328071 H. annuus r1.2 123741560 CCCH-type zinc fingerfamily protein with RNA-binding domain 2 5271 Pentapetalae