Gene : Cagra.0612s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 Genomic Order:  20
Name:  ? Cagra.0612s0020 Secondary Identifier:  ? PAC:28917593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0020 0.5kb upstream 0.5kb upstream 2454 true Scaffold612: 77697-80150 Capsella grandiflora
Cagra.0612s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 77697-78196 Capsella grandiflora
Cagra.0612s0020 0.5kb downstream 0.5kb downstream 2454 true Scaffold612: 78197-80650 Capsella grandiflora
Cagra.0612s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 80151-80650 Capsella grandiflora
Cagra.0612s0020 1.0kb upstream 1.0kb upstream 2954 true Scaffold612: 77197-80150 Capsella grandiflora
Cagra.0612s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 77197-78196 Capsella grandiflora
Cagra.0612s0020 1.0kb downstream 1.0kb downstream 2954 true Scaffold612: 78197-81150 Capsella grandiflora
Cagra.0612s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 80151-81150 Capsella grandiflora
Cagra.0612s0020 2.0kb upstream 2.0kb upstream 3954 true Scaffold612: 76197-80150 Capsella grandiflora
Cagra.0612s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 76197-78196 Capsella grandiflora
Cagra.0612s0020 2.0kb downstream 2.0kb downstream 3954 true Scaffold612: 78197-82150 Capsella grandiflora
Cagra.0612s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 80151-82150 Capsella grandiflora
Cagra.0612s0020 5.0kb upstream 5.0kb upstream 6954 true Scaffold612: 73197-80150 Capsella grandiflora
Cagra.0612s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 73197-78196 Capsella grandiflora
Cagra.0612s0020 5.0kb downstream 5.0kb downstream 6954 true Scaffold612: 78197-85150 Capsella grandiflora
Cagra.0612s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 80151-85150 Capsella grandiflora
Cagra.0612s0020 10.0kb upstream 10.0kb upstream 11954 true Scaffold612: 68197-80150 Capsella grandiflora
Cagra.0612s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 68197-78196 Capsella grandiflora
Cagra.0612s0020 10.0kb downstream 10.0kb downstream 11954 true Scaffold612: 78197-90150 Capsella grandiflora
Cagra.0612s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 80151-90150 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375737 5261 Brassicaceae View MSA
123834101 5264 Brassicales-Malvales View MSA
124346427 5266 SBM View MSA
124244625 5268 Malvidae View MSA
124072958 5270 Rosid View MSA
123741560 5271 Pentapetalae View MSA
122786150 5272 Eudicot View MSA
122046764 5273 Angiosperm View MSA
121351034 5274 Embryophyte View MSA
123381984 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain