Gene : Glyma.18G081000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 Genomic Order:  810
Name:  ? Glyma.18G081000 Secondary Identifier:  ? PAC:30555341
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G081000 0.5kb upstream 0.5kb upstream 4934 true Chr18: 7802031-7806964 Glycine max
Glyma.18G081000 0.5kb upstream 0.5kb upstream 500 false Chr18: 7802031-7802530 Glycine max
Glyma.18G081000 0.5kb downstream 0.5kb downstream 4934 true Chr18: 7802531-7807464 Glycine max
Glyma.18G081000 0.5kb downstream 0.5kb downstream 500 false Chr18: 7806965-7807464 Glycine max
Glyma.18G081000 1.0kb upstream 1.0kb upstream 5434 true Chr18: 7801531-7806964 Glycine max
Glyma.18G081000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7801531-7802530 Glycine max
Glyma.18G081000 1.0kb downstream 1.0kb downstream 5434 true Chr18: 7802531-7807964 Glycine max
Glyma.18G081000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7806965-7807964 Glycine max
Glyma.18G081000 2.0kb upstream 2.0kb upstream 6434 true Chr18: 7800531-7806964 Glycine max
Glyma.18G081000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7800531-7802530 Glycine max
Glyma.18G081000 2.0kb downstream 2.0kb downstream 6434 true Chr18: 7802531-7808964 Glycine max
Glyma.18G081000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7806965-7808964 Glycine max
Glyma.18G081000 5.0kb upstream 5.0kb upstream 9434 true Chr18: 7797531-7806964 Glycine max
Glyma.18G081000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7797531-7802530 Glycine max
Glyma.18G081000 5.0kb downstream 5.0kb downstream 9434 true Chr18: 7802531-7811964 Glycine max
Glyma.18G081000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7806965-7811964 Glycine max
Glyma.18G081000 10.0kb upstream 10.0kb upstream 14434 true Chr18: 7792531-7806964 Glycine max
Glyma.18G081000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7792531-7802530 Glycine max
Glyma.18G081000 10.0kb downstream 10.0kb downstream 14434 true Chr18: 7802531-7816964 Glycine max
Glyma.18G081000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7806965-7816964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310447 5265 Fabidae View MSA
124072958 5270 Rosid View MSA
123741560 5271 Pentapetalae View MSA
122786150 5272 Eudicot View MSA
122046764 5273 Angiosperm View MSA
121351034 5274 Embryophyte View MSA
123381984 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0094105 0.0 0.0447127 Low Low
cufflinks 0.0272963 0.0 0.113399 Low  
cufflinks 0.0242183 0.0 0.104206 Low  
cufflinks 0.385905 0.0 1.85174   High
cufflinks 0.118275 0.0 0.462721 Low  
cufflinks 0.0914631 0.0 0.361549 Low  
cufflinks 0.404222 0.0 2.55   High
cufflinks 0.116583 0.0 0.455786 Low  
cufflinks 0.287504 0.0 1.86227    
cufflinks 0.002     Low Low
cufflinks 0.01     Low  
cufflinks 0.22       High
cufflinks 0.012     Low  
cufflinks 0.007     Low  
cufflinks 0.046     Low  
cufflinks 0.038     Low  
cufflinks 0.069        
cufflinks 1.09       High
cufflinks 0.008     Low  
cufflinks 0.035     Low  
cufflinks 0.005     Low  
cufflinks 0.018     Low  
cufflinks 0.006     Low  
cufflinks 0.016     Low  
cufflinks 0.032     Low  
cufflinks 0.015     Low  

0 Strain