Gene : Eucgr.F00620 E. grandis v2.0
Defline:  (1 of 2) PTHR24009:SF4 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 Genomic Order:  604
Name:  ? Eucgr.F00620 Secondary Identifier:  ? PAC:32056585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00620 0.5kb upstream 0.5kb upstream 4575 true Chr06: 9136199-9140773 Eucalyptus grandis
Eucgr.F00620 0.5kb upstream 0.5kb upstream 500 false Chr06: 9136199-9136698 Eucalyptus grandis
Eucgr.F00620 0.5kb downstream 0.5kb downstream 4575 true Chr06: 9136699-9141273 Eucalyptus grandis
Eucgr.F00620 0.5kb downstream 0.5kb downstream 500 false Chr06: 9140774-9141273 Eucalyptus grandis
Eucgr.F00620 1.0kb upstream 1.0kb upstream 5075 true Chr06: 9135699-9140773 Eucalyptus grandis
Eucgr.F00620 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9135699-9136698 Eucalyptus grandis
Eucgr.F00620 1.0kb downstream 1.0kb downstream 5075 true Chr06: 9136699-9141773 Eucalyptus grandis
Eucgr.F00620 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9140774-9141773 Eucalyptus grandis
Eucgr.F00620 2.0kb upstream 2.0kb upstream 6075 true Chr06: 9134699-9140773 Eucalyptus grandis
Eucgr.F00620 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9134699-9136698 Eucalyptus grandis
Eucgr.F00620 2.0kb downstream 2.0kb downstream 6075 true Chr06: 9136699-9142773 Eucalyptus grandis
Eucgr.F00620 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9140774-9142773 Eucalyptus grandis
Eucgr.F00620 5.0kb upstream 5.0kb upstream 9075 true Chr06: 9131699-9140773 Eucalyptus grandis
Eucgr.F00620 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9131699-9136698 Eucalyptus grandis
Eucgr.F00620 5.0kb downstream 5.0kb downstream 9075 true Chr06: 9136699-9145773 Eucalyptus grandis
Eucgr.F00620 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9140774-9145773 Eucalyptus grandis
Eucgr.F00620 10.0kb upstream 10.0kb upstream 14075 true Chr06: 9126699-9140773 Eucalyptus grandis
Eucgr.F00620 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9126699-9136698 Eucalyptus grandis
Eucgr.F00620 10.0kb downstream 10.0kb downstream 14075 true Chr06: 9136699-9150773 Eucalyptus grandis
Eucgr.F00620 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9140774-9150773 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072958 5270 Rosid View MSA
123741560 5271 Pentapetalae View MSA
122786150 5272 Eudicot View MSA
122046764 5273 Angiosperm View MSA
121351034 5274 Embryophyte View MSA
123381984 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09385 0.0 6.87119   Low
cufflinks 2.61725 0.0 6.88635    
cufflinks 3.49506 0.0 8.81949    
cufflinks 3.85504 0.0 9.57991    
cufflinks 5.55325 0.0 15.5879    
cufflinks 6.42735 0.0 15.0919   High

0 Strain