Gene : Carub.0005s1798 C. rubella v1.1
Defline:  (1 of 3) PTHR23092//PTHR23092:SF30 - TOPOISOMERASE-RELATED PROTEIN // NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  1798
Name:  ? Carub.0005s1798 Secondary Identifier:  ? PAC:39224735
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1798 0.5kb upstream 0.5kb upstream 5231 true scaffold_5: 9244667-9249897 Capsella rubella
Carub.0005s1798 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9244667-9245166 Capsella rubella
Carub.0005s1798 0.5kb downstream 0.5kb downstream 5231 true scaffold_5: 9245167-9250397 Capsella rubella
Carub.0005s1798 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9249898-9250397 Capsella rubella
Carub.0005s1798 1.0kb upstream 1.0kb upstream 5731 true scaffold_5: 9244167-9249897 Capsella rubella
Carub.0005s1798 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9244167-9245166 Capsella rubella
Carub.0005s1798 1.0kb downstream 1.0kb downstream 5731 true scaffold_5: 9245167-9250897 Capsella rubella
Carub.0005s1798 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9249898-9250897 Capsella rubella
Carub.0005s1798 2.0kb upstream 2.0kb upstream 6731 true scaffold_5: 9243167-9249897 Capsella rubella
Carub.0005s1798 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9243167-9245166 Capsella rubella
Carub.0005s1798 2.0kb downstream 2.0kb downstream 6731 true scaffold_5: 9245167-9251897 Capsella rubella
Carub.0005s1798 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9249898-9251897 Capsella rubella
Carub.0005s1798 5.0kb upstream 5.0kb upstream 9731 true scaffold_5: 9240167-9249897 Capsella rubella
Carub.0005s1798 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9240167-9245166 Capsella rubella
Carub.0005s1798 5.0kb downstream 5.0kb downstream 9731 true scaffold_5: 9245167-9254897 Capsella rubella
Carub.0005s1798 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9249898-9254897 Capsella rubella
Carub.0005s1798 10.0kb upstream 10.0kb upstream 14731 true scaffold_5: 9235167-9249897 Capsella rubella
Carub.0005s1798 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9235167-9245166 Capsella rubella
Carub.0005s1798 10.0kb downstream 10.0kb downstream 14731 true scaffold_5: 9245167-9259897 Capsella rubella
Carub.0005s1798 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9249898-9259897 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360249 5261 Brassicaceae View MSA
123834360 5264 Brassicales-Malvales View MSA
124338817 5266 SBM View MSA
124248322 5268 Malvidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain