Gene : Carub.0005s1826 C. rubella v1.1
Defline:  (1 of 3) PTHR10015//PTHR10015:SF186 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED Genomic Order:  1826
Name:  ? Carub.0005s1826 Secondary Identifier:  ? PAC:39226071
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1826 0.5kb upstream 0.5kb upstream 2312 true scaffold_5: 9356427-9358738 Capsella rubella
Carub.0005s1826 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9356427-9356926 Capsella rubella
Carub.0005s1826 0.5kb downstream 0.5kb downstream 2312 true scaffold_5: 9356927-9359238 Capsella rubella
Carub.0005s1826 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9358739-9359238 Capsella rubella
Carub.0005s1826 1.0kb upstream 1.0kb upstream 2812 true scaffold_5: 9355927-9358738 Capsella rubella
Carub.0005s1826 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9355927-9356926 Capsella rubella
Carub.0005s1826 1.0kb downstream 1.0kb downstream 2812 true scaffold_5: 9356927-9359738 Capsella rubella
Carub.0005s1826 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9358739-9359738 Capsella rubella
Carub.0005s1826 2.0kb upstream 2.0kb upstream 3812 true scaffold_5: 9354927-9358738 Capsella rubella
Carub.0005s1826 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9354927-9356926 Capsella rubella
Carub.0005s1826 2.0kb downstream 2.0kb downstream 3812 true scaffold_5: 9356927-9360738 Capsella rubella
Carub.0005s1826 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9358739-9360738 Capsella rubella
Carub.0005s1826 5.0kb upstream 5.0kb upstream 6812 true scaffold_5: 9351927-9358738 Capsella rubella
Carub.0005s1826 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9351927-9356926 Capsella rubella
Carub.0005s1826 5.0kb downstream 5.0kb downstream 6812 true scaffold_5: 9356927-9363738 Capsella rubella
Carub.0005s1826 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9358739-9363738 Capsella rubella
Carub.0005s1826 10.0kb upstream 10.0kb upstream 11812 true scaffold_5: 9346927-9358738 Capsella rubella
Carub.0005s1826 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9346927-9356926 Capsella rubella
Carub.0005s1826 10.0kb downstream 10.0kb downstream 11812 true scaffold_5: 9356927-9368738 Capsella rubella
Carub.0005s1826 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9358739-9368738 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365017 5261 Brassicaceae View MSA
123838243 5264 Brassicales-Malvales View MSA
124348589 5266 SBM View MSA
124254362 5268 Malvidae View MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain