Gene : Carub.0005s1844 C. rubella v1.1
Genomic Order:  1844 Name:  ? Carub.0005s1844
Secondary Identifier:  ? PAC:39226349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1844 0.5kb upstream 0.5kb upstream 2625 true scaffold_5: 9405173-9407797 Capsella rubella
Carub.0005s1844 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9407298-9407797 Capsella rubella
Carub.0005s1844 0.5kb downstream 0.5kb downstream 2625 true scaffold_5: 9404673-9407297 Capsella rubella
Carub.0005s1844 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9404673-9405172 Capsella rubella
Carub.0005s1844 1.0kb upstream 1.0kb upstream 3125 true scaffold_5: 9405173-9408297 Capsella rubella
Carub.0005s1844 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9407298-9408297 Capsella rubella
Carub.0005s1844 1.0kb downstream 1.0kb downstream 3125 true scaffold_5: 9404173-9407297 Capsella rubella
Carub.0005s1844 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9404173-9405172 Capsella rubella
Carub.0005s1844 2.0kb upstream 2.0kb upstream 4125 true scaffold_5: 9405173-9409297 Capsella rubella
Carub.0005s1844 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9407298-9409297 Capsella rubella
Carub.0005s1844 2.0kb downstream 2.0kb downstream 4125 true scaffold_5: 9403173-9407297 Capsella rubella
Carub.0005s1844 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9403173-9405172 Capsella rubella
Carub.0005s1844 5.0kb upstream 5.0kb upstream 7125 true scaffold_5: 9405173-9412297 Capsella rubella
Carub.0005s1844 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9407298-9412297 Capsella rubella
Carub.0005s1844 5.0kb downstream 5.0kb downstream 7125 true scaffold_5: 9400173-9407297 Capsella rubella
Carub.0005s1844 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9400173-9405172 Capsella rubella
Carub.0005s1844 10.0kb upstream 10.0kb upstream 12125 true scaffold_5: 9405173-9417297 Capsella rubella
Carub.0005s1844 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9407298-9417297 Capsella rubella
Carub.0005s1844 10.0kb downstream 10.0kb downstream 12125 true scaffold_5: 9395173-9407297 Capsella rubella
Carub.0005s1844 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9395173-9405172 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362650 5261 Brassicaceae View MSA
123838868 5264 Brassicales-Malvales View MSA
124339911 5266 SBM View MSA
124237529 5268 Malvidae View MSA
124065228 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain