Gene : Carub.0005s1869 C. rubella v1.1

Defline:  (1 of 12) PF01585 - G-patch domain (G-patch) Genomic Order:  1869
Name:  ? Carub.0005s1869 Secondary Identifier:  ? PAC:39224391

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1869 0.5kb upstream 0.5kb upstream 854 true scaffold_5: 9492509-9493362 Capsella rubella
Carub.0005s1869 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9492863-9493362 Capsella rubella
Carub.0005s1869 0.5kb downstream 0.5kb downstream 854 true scaffold_5: 9492009-9492862 Capsella rubella
Carub.0005s1869 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9492009-9492508 Capsella rubella
Carub.0005s1869 1.0kb upstream 1.0kb upstream 1354 true scaffold_5: 9492509-9493862 Capsella rubella
Carub.0005s1869 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9492863-9493862 Capsella rubella
Carub.0005s1869 1.0kb downstream 1.0kb downstream 1354 true scaffold_5: 9491509-9492862 Capsella rubella
Carub.0005s1869 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9491509-9492508 Capsella rubella
Carub.0005s1869 2.0kb upstream 2.0kb upstream 2354 true scaffold_5: 9492509-9494862 Capsella rubella
Carub.0005s1869 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9492863-9494862 Capsella rubella
Carub.0005s1869 2.0kb downstream 2.0kb downstream 2354 true scaffold_5: 9490509-9492862 Capsella rubella
Carub.0005s1869 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9490509-9492508 Capsella rubella
Carub.0005s1869 5.0kb upstream 5.0kb upstream 5354 true scaffold_5: 9492509-9497862 Capsella rubella
Carub.0005s1869 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9492863-9497862 Capsella rubella
Carub.0005s1869 5.0kb downstream 5.0kb downstream 5354 true scaffold_5: 9487509-9492862 Capsella rubella
Carub.0005s1869 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9487509-9492508 Capsella rubella
Carub.0005s1869 10.0kb upstream 10.0kb upstream 10354 true scaffold_5: 9492509-9502862 Capsella rubella
Carub.0005s1869 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9492863-9502862 Capsella rubella
Carub.0005s1869 10.0kb downstream 10.0kb downstream 10354 true scaffold_5: 9482509-9492862 Capsella rubella
Carub.0005s1869 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9482509-9492508 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368932 5261 Brassicaceae View MSA
123835712 5264 Brassicales-Malvales View MSA
124345139 5266 SBM View MSA
124243633 5268 Malvidae View MSA
124065567 5270 Rosid View MSA
123743393 5271 Pentapetalae View MSA
122790143 5272 Eudicot View MSA
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain