Gene : Carub.0005s1902 C. rubella v1.1
Defline:  (1 of 2) PTHR31953//PTHR31953:SF1 - FAMILY NOT NAMED // BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV2-RELATED Genomic Order:  1902
Name:  ? Carub.0005s1902 Secondary Identifier:  ? PAC:39226413
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-621 Capsella rubella pathologic  
Crubella PWY66-373 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1902 0.5kb upstream 0.5kb upstream 2837 true scaffold_5: 9615668-9618504 Capsella rubella
Carub.0005s1902 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9618005-9618504 Capsella rubella
Carub.0005s1902 0.5kb downstream 0.5kb downstream 2837 true scaffold_5: 9615168-9618004 Capsella rubella
Carub.0005s1902 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9615168-9615667 Capsella rubella
Carub.0005s1902 1.0kb upstream 1.0kb upstream 3337 true scaffold_5: 9615668-9619004 Capsella rubella
Carub.0005s1902 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9618005-9619004 Capsella rubella
Carub.0005s1902 1.0kb downstream 1.0kb downstream 3337 true scaffold_5: 9614668-9618004 Capsella rubella
Carub.0005s1902 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9614668-9615667 Capsella rubella
Carub.0005s1902 2.0kb upstream 2.0kb upstream 4337 true scaffold_5: 9615668-9620004 Capsella rubella
Carub.0005s1902 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9618005-9620004 Capsella rubella
Carub.0005s1902 2.0kb downstream 2.0kb downstream 4337 true scaffold_5: 9613668-9618004 Capsella rubella
Carub.0005s1902 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9613668-9615667 Capsella rubella
Carub.0005s1902 5.0kb upstream 5.0kb upstream 7337 true scaffold_5: 9615668-9623004 Capsella rubella
Carub.0005s1902 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9618005-9623004 Capsella rubella
Carub.0005s1902 5.0kb downstream 5.0kb downstream 7337 true scaffold_5: 9610668-9618004 Capsella rubella
Carub.0005s1902 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9610668-9615667 Capsella rubella
Carub.0005s1902 10.0kb upstream 10.0kb upstream 12337 true scaffold_5: 9615668-9628004 Capsella rubella
Carub.0005s1902 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9618005-9628004 Capsella rubella
Carub.0005s1902 10.0kb downstream 10.0kb downstream 12337 true scaffold_5: 9605668-9618004 Capsella rubella
Carub.0005s1902 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9605668-9615667 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372737 5261 Brassicaceae View MSA
123836122 5264 Brassicales-Malvales View MSA
124342713 5266 SBM View MSA
124252063 5268 Malvidae View MSA
124060411 5270 Rosid View MSA
123752983 5271 Pentapetalae View MSA
122793631 5272 Eudicot View MSA
122047232 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain