Gene : Carub.0005s1901 C. rubella v1.1
Defline:  (1 of 2) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Genomic Order:  1901
Name:  ? Carub.0005s1901 Secondary Identifier:  ? PAC:39225677
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1901 0.5kb upstream 0.5kb upstream 1909 true scaffold_5: 9612968-9614876 Capsella rubella
Carub.0005s1901 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9612968-9613467 Capsella rubella
Carub.0005s1901 0.5kb downstream 0.5kb downstream 1909 true scaffold_5: 9613468-9615376 Capsella rubella
Carub.0005s1901 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9614877-9615376 Capsella rubella
Carub.0005s1901 1.0kb upstream 1.0kb upstream 2409 true scaffold_5: 9612468-9614876 Capsella rubella
Carub.0005s1901 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9612468-9613467 Capsella rubella
Carub.0005s1901 1.0kb downstream 1.0kb downstream 2409 true scaffold_5: 9613468-9615876 Capsella rubella
Carub.0005s1901 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9614877-9615876 Capsella rubella
Carub.0005s1901 2.0kb upstream 2.0kb upstream 3409 true scaffold_5: 9611468-9614876 Capsella rubella
Carub.0005s1901 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9611468-9613467 Capsella rubella
Carub.0005s1901 2.0kb downstream 2.0kb downstream 3409 true scaffold_5: 9613468-9616876 Capsella rubella
Carub.0005s1901 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9614877-9616876 Capsella rubella
Carub.0005s1901 5.0kb upstream 5.0kb upstream 6409 true scaffold_5: 9608468-9614876 Capsella rubella
Carub.0005s1901 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9608468-9613467 Capsella rubella
Carub.0005s1901 5.0kb downstream 5.0kb downstream 6409 true scaffold_5: 9613468-9619876 Capsella rubella
Carub.0005s1901 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9614877-9619876 Capsella rubella
Carub.0005s1901 10.0kb upstream 10.0kb upstream 11409 true scaffold_5: 9603468-9614876 Capsella rubella
Carub.0005s1901 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9603468-9613467 Capsella rubella
Carub.0005s1901 10.0kb downstream 10.0kb downstream 11409 true scaffold_5: 9613468-9624876 Capsella rubella
Carub.0005s1901 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9614877-9624876 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379715 5261 Brassicaceae View MSA
123841008 5264 Brassicales-Malvales View MSA
124341254 5266 SBM View MSA
124250872 5268 Malvidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain