Gene : Carub.0005s2151 C. rubella v1.1
Defline:  (1 of 1) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Genomic Order:  2151
Name:  ? Carub.0005s2151 Secondary Identifier:  ? PAC:39223743
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2151 0.5kb upstream 0.5kb upstream 1281 true scaffold_5: 10513684-10514964 Capsella rubella
Carub.0005s2151 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10514465-10514964 Capsella rubella
Carub.0005s2151 0.5kb downstream 0.5kb downstream 1281 true scaffold_5: 10513184-10514464 Capsella rubella
Carub.0005s2151 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10513184-10513683 Capsella rubella
Carub.0005s2151 1.0kb upstream 1.0kb upstream 1781 true scaffold_5: 10513684-10515464 Capsella rubella
Carub.0005s2151 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10514465-10515464 Capsella rubella
Carub.0005s2151 1.0kb downstream 1.0kb downstream 1781 true scaffold_5: 10512684-10514464 Capsella rubella
Carub.0005s2151 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10512684-10513683 Capsella rubella
Carub.0005s2151 2.0kb upstream 2.0kb upstream 2781 true scaffold_5: 10513684-10516464 Capsella rubella
Carub.0005s2151 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10514465-10516464 Capsella rubella
Carub.0005s2151 2.0kb downstream 2.0kb downstream 2781 true scaffold_5: 10511684-10514464 Capsella rubella
Carub.0005s2151 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10511684-10513683 Capsella rubella
Carub.0005s2151 5.0kb upstream 5.0kb upstream 5781 true scaffold_5: 10513684-10519464 Capsella rubella
Carub.0005s2151 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10514465-10519464 Capsella rubella
Carub.0005s2151 5.0kb downstream 5.0kb downstream 5781 true scaffold_5: 10508684-10514464 Capsella rubella
Carub.0005s2151 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10508684-10513683 Capsella rubella
Carub.0005s2151 10.0kb upstream 10.0kb upstream 10781 true scaffold_5: 10513684-10524464 Capsella rubella
Carub.0005s2151 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10514465-10524464 Capsella rubella
Carub.0005s2151 10.0kb downstream 10.0kb downstream 10781 true scaffold_5: 10503684-10514464 Capsella rubella
Carub.0005s2151 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10503684-10513683 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362021 5261 Brassicaceae View MSA
123831038 5264 Brassicales-Malvales View MSA
124350033 5266 SBM View MSA
124242489 5268 Malvidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain