Gene : Carub.0005s2150 C. rubella v1.1
Defline:  (1 of 1) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Genomic Order:  2150
Name:  ? Carub.0005s2150 Secondary Identifier:  ? PAC:39223788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2150 0.5kb upstream 0.5kb upstream 2002 true scaffold_5: 10511276-10513277 Capsella rubella
Carub.0005s2150 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10512778-10513277 Capsella rubella
Carub.0005s2150 0.5kb downstream 0.5kb downstream 2002 true scaffold_5: 10510776-10512777 Capsella rubella
Carub.0005s2150 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10510776-10511275 Capsella rubella
Carub.0005s2150 1.0kb upstream 1.0kb upstream 2502 true scaffold_5: 10511276-10513777 Capsella rubella
Carub.0005s2150 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10512778-10513777 Capsella rubella
Carub.0005s2150 1.0kb downstream 1.0kb downstream 2502 true scaffold_5: 10510276-10512777 Capsella rubella
Carub.0005s2150 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10510276-10511275 Capsella rubella
Carub.0005s2150 2.0kb upstream 2.0kb upstream 3502 true scaffold_5: 10511276-10514777 Capsella rubella
Carub.0005s2150 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10512778-10514777 Capsella rubella
Carub.0005s2150 2.0kb downstream 2.0kb downstream 3502 true scaffold_5: 10509276-10512777 Capsella rubella
Carub.0005s2150 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10509276-10511275 Capsella rubella
Carub.0005s2150 5.0kb upstream 5.0kb upstream 6502 true scaffold_5: 10511276-10517777 Capsella rubella
Carub.0005s2150 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10512778-10517777 Capsella rubella
Carub.0005s2150 5.0kb downstream 5.0kb downstream 6502 true scaffold_5: 10506276-10512777 Capsella rubella
Carub.0005s2150 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10506276-10511275 Capsella rubella
Carub.0005s2150 10.0kb upstream 10.0kb upstream 11502 true scaffold_5: 10511276-10522777 Capsella rubella
Carub.0005s2150 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10512778-10522777 Capsella rubella
Carub.0005s2150 10.0kb downstream 10.0kb downstream 11502 true scaffold_5: 10501276-10512777 Capsella rubella
Carub.0005s2150 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10501276-10511275 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374272 5261 Brassicaceae View MSA
123840113 5264 Brassicales-Malvales View MSA
124341032 5266 SBM View MSA
124253562 5268 Malvidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain