Gene : Carub.0005s2166 C. rubella v1.1
Defline:  (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Genomic Order:  2166
Name:  ? Carub.0005s2166 Secondary Identifier:  ? PAC:39226805
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY4FS-7 Capsella rubella pathologic  
Crubella PWY-5269 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2166 0.5kb upstream 0.5kb upstream 2762 true scaffold_5: 10570582-10573343 Capsella rubella
Carub.0005s2166 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10570582-10571081 Capsella rubella
Carub.0005s2166 0.5kb downstream 0.5kb downstream 2762 true scaffold_5: 10571082-10573843 Capsella rubella
Carub.0005s2166 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10573344-10573843 Capsella rubella
Carub.0005s2166 1.0kb upstream 1.0kb upstream 3262 true scaffold_5: 10570082-10573343 Capsella rubella
Carub.0005s2166 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10570082-10571081 Capsella rubella
Carub.0005s2166 1.0kb downstream 1.0kb downstream 3262 true scaffold_5: 10571082-10574343 Capsella rubella
Carub.0005s2166 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10573344-10574343 Capsella rubella
Carub.0005s2166 2.0kb upstream 2.0kb upstream 4262 true scaffold_5: 10569082-10573343 Capsella rubella
Carub.0005s2166 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10569082-10571081 Capsella rubella
Carub.0005s2166 2.0kb downstream 2.0kb downstream 4262 true scaffold_5: 10571082-10575343 Capsella rubella
Carub.0005s2166 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10573344-10575343 Capsella rubella
Carub.0005s2166 5.0kb upstream 5.0kb upstream 7262 true scaffold_5: 10566082-10573343 Capsella rubella
Carub.0005s2166 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10566082-10571081 Capsella rubella
Carub.0005s2166 5.0kb downstream 5.0kb downstream 7262 true scaffold_5: 10571082-10578343 Capsella rubella
Carub.0005s2166 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10573344-10578343 Capsella rubella
Carub.0005s2166 10.0kb upstream 10.0kb upstream 12262 true scaffold_5: 10561082-10573343 Capsella rubella
Carub.0005s2166 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10561082-10571081 Capsella rubella
Carub.0005s2166 10.0kb downstream 10.0kb downstream 12262 true scaffold_5: 10571082-10583343 Capsella rubella
Carub.0005s2166 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10573344-10583343 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
122368221 5261 Brassicaceae View MSA
123799515 5264 Brassicales-Malvales View MSA
124297027 5266 SBM View MSA
124250044 5268 Malvidae View MSA
124064050 5270 Rosid View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain