Gene : Carub.0005s2188 C. rubella v1.1
Defline:  (1 of 2) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1) Genomic Order:  2188
Name:  ? Carub.0005s2188 Secondary Identifier:  ? PAC:39226389
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2188 0.5kb upstream 0.5kb upstream 4499 true scaffold_5: 10653903-10658401 Capsella rubella
Carub.0005s2188 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10657902-10658401 Capsella rubella
Carub.0005s2188 0.5kb downstream 0.5kb downstream 4499 true scaffold_5: 10653403-10657901 Capsella rubella
Carub.0005s2188 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10653403-10653902 Capsella rubella
Carub.0005s2188 1.0kb upstream 1.0kb upstream 4999 true scaffold_5: 10653903-10658901 Capsella rubella
Carub.0005s2188 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10657902-10658901 Capsella rubella
Carub.0005s2188 1.0kb downstream 1.0kb downstream 4999 true scaffold_5: 10652903-10657901 Capsella rubella
Carub.0005s2188 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10652903-10653902 Capsella rubella
Carub.0005s2188 2.0kb upstream 2.0kb upstream 5999 true scaffold_5: 10653903-10659901 Capsella rubella
Carub.0005s2188 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10657902-10659901 Capsella rubella
Carub.0005s2188 2.0kb downstream 2.0kb downstream 5999 true scaffold_5: 10651903-10657901 Capsella rubella
Carub.0005s2188 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10651903-10653902 Capsella rubella
Carub.0005s2188 5.0kb upstream 5.0kb upstream 8999 true scaffold_5: 10653903-10662901 Capsella rubella
Carub.0005s2188 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10657902-10662901 Capsella rubella
Carub.0005s2188 5.0kb downstream 5.0kb downstream 8999 true scaffold_5: 10648903-10657901 Capsella rubella
Carub.0005s2188 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10648903-10653902 Capsella rubella
Carub.0005s2188 10.0kb upstream 10.0kb upstream 13999 true scaffold_5: 10653903-10667901 Capsella rubella
Carub.0005s2188 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10657902-10667901 Capsella rubella
Carub.0005s2188 10.0kb downstream 10.0kb downstream 13999 true scaffold_5: 10643903-10657901 Capsella rubella
Carub.0005s2188 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10643903-10653902 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334881 5261 Brassicaceae Singleton cluster - no MSA
123775682 5264 Brassicales-Malvales Singleton cluster - no MSA
124274085 5266 SBM Singleton cluster - no MSA
124252638 5268 Malvidae View MSA
123952786 5270 Rosid View MSA
123530427 5271 Pentapetalae View MSA
122565390 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain