Gene : Carub.0005s2195 C. rubella v1.1
Defline:  (1 of 4) 1.1.1.100 - 3-oxoacyl-[acyl-carrier-protein] reductase Genomic Order:  2195
Name:  ? Carub.0005s2195 Secondary Identifier:  ? PAC:39226479
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella FASYN-ELONG-PWY Capsella rubella pathologic  
Crubella PWY-5156 Capsella rubella pathologic  
Crubella PWY-5971 Capsella rubella pathologic  
Crubella PWY-5973 Capsella rubella pathologic  
Crubella PWY-5989 Capsella rubella pathologic  
Crubella PWY-6282 Capsella rubella pathologic  
Crubella PWY-7388 Capsella rubella pathologic  
Crubella PWY-7663 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2195 0.5kb upstream 0.5kb upstream 1593 true scaffold_5: 10682733-10684325 Capsella rubella
Carub.0005s2195 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10682733-10683232 Capsella rubella
Carub.0005s2195 0.5kb downstream 0.5kb downstream 1593 true scaffold_5: 10683233-10684825 Capsella rubella
Carub.0005s2195 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10684326-10684825 Capsella rubella
Carub.0005s2195 1.0kb upstream 1.0kb upstream 2093 true scaffold_5: 10682233-10684325 Capsella rubella
Carub.0005s2195 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10682233-10683232 Capsella rubella
Carub.0005s2195 1.0kb downstream 1.0kb downstream 2093 true scaffold_5: 10683233-10685325 Capsella rubella
Carub.0005s2195 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10684326-10685325 Capsella rubella
Carub.0005s2195 2.0kb upstream 2.0kb upstream 3093 true scaffold_5: 10681233-10684325 Capsella rubella
Carub.0005s2195 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10681233-10683232 Capsella rubella
Carub.0005s2195 2.0kb downstream 2.0kb downstream 3093 true scaffold_5: 10683233-10686325 Capsella rubella
Carub.0005s2195 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10684326-10686325 Capsella rubella
Carub.0005s2195 5.0kb upstream 5.0kb upstream 6093 true scaffold_5: 10678233-10684325 Capsella rubella
Carub.0005s2195 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10678233-10683232 Capsella rubella
Carub.0005s2195 5.0kb downstream 5.0kb downstream 6093 true scaffold_5: 10683233-10689325 Capsella rubella
Carub.0005s2195 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10684326-10689325 Capsella rubella
Carub.0005s2195 10.0kb upstream 10.0kb upstream 11093 true scaffold_5: 10673233-10684325 Capsella rubella
Carub.0005s2195 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10673233-10683232 Capsella rubella
Carub.0005s2195 10.0kb downstream 10.0kb downstream 11093 true scaffold_5: 10683233-10694325 Capsella rubella
Carub.0005s2195 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10684326-10694325 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379286 5261 Brassicaceae View MSA
123835400 5264 Brassicales-Malvales View MSA
124349739 5266 SBM View MSA
124251104 5268 Malvidae View MSA
124062329 5270 Rosid View MSA
123751674 5271 Pentapetalae View MSA
122788273 5272 Eudicot View MSA
122044153 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121344803 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain