Gene : Carub.0005s2222 C. rubella v1.1
Defline:  (1 of 3) PTHR31867//PTHR31867:SF5 - FAMILY NOT NAMED // EXPANSIN-A16-RELATED Genomic Order:  2222
Name:  ? Carub.0005s2222 Secondary Identifier:  ? PAC:39224177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2222 0.5kb upstream 0.5kb upstream 1542 true scaffold_5: 10792677-10794218 Capsella rubella
Carub.0005s2222 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10793719-10794218 Capsella rubella
Carub.0005s2222 0.5kb downstream 0.5kb downstream 1542 true scaffold_5: 10792177-10793718 Capsella rubella
Carub.0005s2222 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10792177-10792676 Capsella rubella
Carub.0005s2222 1.0kb upstream 1.0kb upstream 2042 true scaffold_5: 10792677-10794718 Capsella rubella
Carub.0005s2222 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10793719-10794718 Capsella rubella
Carub.0005s2222 1.0kb downstream 1.0kb downstream 2042 true scaffold_5: 10791677-10793718 Capsella rubella
Carub.0005s2222 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10791677-10792676 Capsella rubella
Carub.0005s2222 2.0kb upstream 2.0kb upstream 3042 true scaffold_5: 10792677-10795718 Capsella rubella
Carub.0005s2222 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10793719-10795718 Capsella rubella
Carub.0005s2222 2.0kb downstream 2.0kb downstream 3042 true scaffold_5: 10790677-10793718 Capsella rubella
Carub.0005s2222 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10790677-10792676 Capsella rubella
Carub.0005s2222 5.0kb upstream 5.0kb upstream 6042 true scaffold_5: 10792677-10798718 Capsella rubella
Carub.0005s2222 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10793719-10798718 Capsella rubella
Carub.0005s2222 5.0kb downstream 5.0kb downstream 6042 true scaffold_5: 10787677-10793718 Capsella rubella
Carub.0005s2222 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10787677-10792676 Capsella rubella
Carub.0005s2222 10.0kb upstream 10.0kb upstream 11042 true scaffold_5: 10792677-10803718 Capsella rubella
Carub.0005s2222 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10793719-10803718 Capsella rubella
Carub.0005s2222 10.0kb downstream 10.0kb downstream 11042 true scaffold_5: 10782677-10793718 Capsella rubella
Carub.0005s2222 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10782677-10792676 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375031 5261 Brassicaceae View MSA
123800866 5264 Brassicales-Malvales View MSA
124298229 5266 SBM View MSA
124149924 5268 Malvidae View MSA
123875637 5270 Rosid View MSA
123459428 5271 Pentapetalae View MSA
122494819 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain