Gene : Carub.0005s2058 C. rubella v1.1
Defline:  (1 of 43) PF00582 - Universal stress protein family (Usp) Genomic Order:  2058
Name:  ? Carub.0005s2058 Secondary Identifier:  ? PAC:39226653
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2058 0.5kb upstream 0.5kb upstream 2014 true scaffold_5: 10164171-10166184 Capsella rubella
Carub.0005s2058 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10165685-10166184 Capsella rubella
Carub.0005s2058 0.5kb downstream 0.5kb downstream 2014 true scaffold_5: 10163671-10165684 Capsella rubella
Carub.0005s2058 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10163671-10164170 Capsella rubella
Carub.0005s2058 1.0kb upstream 1.0kb upstream 2514 true scaffold_5: 10164171-10166684 Capsella rubella
Carub.0005s2058 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10165685-10166684 Capsella rubella
Carub.0005s2058 1.0kb downstream 1.0kb downstream 2514 true scaffold_5: 10163171-10165684 Capsella rubella
Carub.0005s2058 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10163171-10164170 Capsella rubella
Carub.0005s2058 2.0kb upstream 2.0kb upstream 3514 true scaffold_5: 10164171-10167684 Capsella rubella
Carub.0005s2058 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10165685-10167684 Capsella rubella
Carub.0005s2058 2.0kb downstream 2.0kb downstream 3514 true scaffold_5: 10162171-10165684 Capsella rubella
Carub.0005s2058 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10162171-10164170 Capsella rubella
Carub.0005s2058 5.0kb upstream 5.0kb upstream 6514 true scaffold_5: 10164171-10170684 Capsella rubella
Carub.0005s2058 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10165685-10170684 Capsella rubella
Carub.0005s2058 5.0kb downstream 5.0kb downstream 6514 true scaffold_5: 10159171-10165684 Capsella rubella
Carub.0005s2058 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10159171-10164170 Capsella rubella
Carub.0005s2058 10.0kb upstream 10.0kb upstream 11514 true scaffold_5: 10164171-10175684 Capsella rubella
Carub.0005s2058 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10165685-10175684 Capsella rubella
Carub.0005s2058 10.0kb downstream 10.0kb downstream 11514 true scaffold_5: 10154171-10165684 Capsella rubella
Carub.0005s2058 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10154171-10164170 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380009 5261 Brassicaceae View MSA
123834842 5264 Brassicales-Malvales View MSA
124350362 5266 SBM View MSA
124243263 5268 Malvidae View MSA
124061330 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain