Gene : Carub.0005s2057 C. rubella v1.1
Defline:  (1 of 63) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  2057
Name:  ? Carub.0005s2057 Secondary Identifier:  ? PAC:39225759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2057 0.5kb upstream 0.5kb upstream 1168 true scaffold_5: 10162183-10163350 Capsella rubella
Carub.0005s2057 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10162851-10163350 Capsella rubella
Carub.0005s2057 0.5kb downstream 0.5kb downstream 1168 true scaffold_5: 10161683-10162850 Capsella rubella
Carub.0005s2057 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10161683-10162182 Capsella rubella
Carub.0005s2057 1.0kb upstream 1.0kb upstream 1668 true scaffold_5: 10162183-10163850 Capsella rubella
Carub.0005s2057 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10162851-10163850 Capsella rubella
Carub.0005s2057 1.0kb downstream 1.0kb downstream 1668 true scaffold_5: 10161183-10162850 Capsella rubella
Carub.0005s2057 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10161183-10162182 Capsella rubella
Carub.0005s2057 2.0kb upstream 2.0kb upstream 2668 true scaffold_5: 10162183-10164850 Capsella rubella
Carub.0005s2057 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10162851-10164850 Capsella rubella
Carub.0005s2057 2.0kb downstream 2.0kb downstream 2668 true scaffold_5: 10160183-10162850 Capsella rubella
Carub.0005s2057 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10160183-10162182 Capsella rubella
Carub.0005s2057 5.0kb upstream 5.0kb upstream 5668 true scaffold_5: 10162183-10167850 Capsella rubella
Carub.0005s2057 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10162851-10167850 Capsella rubella
Carub.0005s2057 5.0kb downstream 5.0kb downstream 5668 true scaffold_5: 10157183-10162850 Capsella rubella
Carub.0005s2057 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10157183-10162182 Capsella rubella
Carub.0005s2057 10.0kb upstream 10.0kb upstream 10668 true scaffold_5: 10162183-10172850 Capsella rubella
Carub.0005s2057 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10162851-10172850 Capsella rubella
Carub.0005s2057 10.0kb downstream 10.0kb downstream 10668 true scaffold_5: 10152183-10162850 Capsella rubella
Carub.0005s2057 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10152183-10162182 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366699 5261 Brassicaceae View MSA
123835793 5264 Brassicales-Malvales View MSA
124350487 5266 SBM View MSA
124244554 5268 Malvidae View MSA
124067759 5270 Rosid View MSA
123740142 5271 Pentapetalae View MSA
122796830 5272 Eudicot View MSA
122050934 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain