Gene : Carub.0005s2061 C. rubella v1.1
Defline:  (1 of 3) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  2061
Name:  ? Carub.0005s2061 Secondary Identifier:  ? PAC:39225321
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2061 0.5kb upstream 0.5kb upstream 3003 true scaffold_5: 10182215-10185217 Capsella rubella
Carub.0005s2061 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10182215-10182714 Capsella rubella
Carub.0005s2061 0.5kb downstream 0.5kb downstream 3003 true scaffold_5: 10182715-10185717 Capsella rubella
Carub.0005s2061 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10185218-10185717 Capsella rubella
Carub.0005s2061 1.0kb upstream 1.0kb upstream 3503 true scaffold_5: 10181715-10185217 Capsella rubella
Carub.0005s2061 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10181715-10182714 Capsella rubella
Carub.0005s2061 1.0kb downstream 1.0kb downstream 3503 true scaffold_5: 10182715-10186217 Capsella rubella
Carub.0005s2061 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10185218-10186217 Capsella rubella
Carub.0005s2061 2.0kb upstream 2.0kb upstream 4503 true scaffold_5: 10180715-10185217 Capsella rubella
Carub.0005s2061 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10180715-10182714 Capsella rubella
Carub.0005s2061 2.0kb downstream 2.0kb downstream 4503 true scaffold_5: 10182715-10187217 Capsella rubella
Carub.0005s2061 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10185218-10187217 Capsella rubella
Carub.0005s2061 5.0kb upstream 5.0kb upstream 7503 true scaffold_5: 10177715-10185217 Capsella rubella
Carub.0005s2061 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10177715-10182714 Capsella rubella
Carub.0005s2061 5.0kb downstream 5.0kb downstream 7503 true scaffold_5: 10182715-10190217 Capsella rubella
Carub.0005s2061 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10185218-10190217 Capsella rubella
Carub.0005s2061 10.0kb upstream 10.0kb upstream 12503 true scaffold_5: 10172715-10185217 Capsella rubella
Carub.0005s2061 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10172715-10182714 Capsella rubella
Carub.0005s2061 10.0kb downstream 10.0kb downstream 12503 true scaffold_5: 10182715-10195217 Capsella rubella
Carub.0005s2061 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10185218-10195217 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374850 5261 Brassicaceae View MSA
123838533 5264 Brassicales-Malvales View MSA
124344275 5266 SBM View MSA
124243094 5268 Malvidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain