Gene : Carub.0005s2086 C. rubella v1.1
Defline:  (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  2086
Name:  ? Carub.0005s2086 Secondary Identifier:  ? PAC:39226570
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7238 Capsella rubella pathologic  
Crubella SUCSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2086 0.5kb upstream 0.5kb upstream 3496 true scaffold_5: 10262480-10265975 Capsella rubella
Carub.0005s2086 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10265476-10265975 Capsella rubella
Carub.0005s2086 0.5kb downstream 0.5kb downstream 3496 true scaffold_5: 10261980-10265475 Capsella rubella
Carub.0005s2086 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10261980-10262479 Capsella rubella
Carub.0005s2086 1.0kb upstream 1.0kb upstream 3996 true scaffold_5: 10262480-10266475 Capsella rubella
Carub.0005s2086 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10265476-10266475 Capsella rubella
Carub.0005s2086 1.0kb downstream 1.0kb downstream 3996 true scaffold_5: 10261480-10265475 Capsella rubella
Carub.0005s2086 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10261480-10262479 Capsella rubella
Carub.0005s2086 2.0kb upstream 2.0kb upstream 4996 true scaffold_5: 10262480-10267475 Capsella rubella
Carub.0005s2086 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10265476-10267475 Capsella rubella
Carub.0005s2086 2.0kb downstream 2.0kb downstream 4996 true scaffold_5: 10260480-10265475 Capsella rubella
Carub.0005s2086 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10260480-10262479 Capsella rubella
Carub.0005s2086 5.0kb upstream 5.0kb upstream 7996 true scaffold_5: 10262480-10270475 Capsella rubella
Carub.0005s2086 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10265476-10270475 Capsella rubella
Carub.0005s2086 5.0kb downstream 5.0kb downstream 7996 true scaffold_5: 10257480-10265475 Capsella rubella
Carub.0005s2086 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10257480-10262479 Capsella rubella
Carub.0005s2086 10.0kb upstream 10.0kb upstream 12996 true scaffold_5: 10262480-10275475 Capsella rubella
Carub.0005s2086 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10265476-10275475 Capsella rubella
Carub.0005s2086 10.0kb downstream 10.0kb downstream 12996 true scaffold_5: 10252480-10265475 Capsella rubella
Carub.0005s2086 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10252480-10262479 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511775 5273 Angiosperm View MSA
122378731 5261 Brassicaceae View MSA
123801974 5264 Brassicales-Malvales View MSA
124299210 5266 SBM View MSA
124150686 5268 Malvidae View MSA
123876259 5270 Rosid View MSA
123459957 5271 Pentapetalae View MSA
122495338 5272 Eudicot View MSA
120784806 5274 Embryophyte View MSA
122826698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain