Gene : Carub.0005s2107 C. rubella v1.1
Defline:  (1 of 1) PTHR11654:SF133 - PROTEIN NRT1/ PTR FAMILY 5.4 Genomic Order:  2107
Name:  ? Carub.0005s2107 Secondary Identifier:  ? PAC:39225623
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2107 0.5kb upstream 0.5kb upstream 4034 true scaffold_5: 10349202-10353235 Capsella rubella
Carub.0005s2107 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10349202-10349701 Capsella rubella
Carub.0005s2107 0.5kb downstream 0.5kb downstream 4034 true scaffold_5: 10349702-10353735 Capsella rubella
Carub.0005s2107 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10353236-10353735 Capsella rubella
Carub.0005s2107 1.0kb upstream 1.0kb upstream 4534 true scaffold_5: 10348702-10353235 Capsella rubella
Carub.0005s2107 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10348702-10349701 Capsella rubella
Carub.0005s2107 1.0kb downstream 1.0kb downstream 4534 true scaffold_5: 10349702-10354235 Capsella rubella
Carub.0005s2107 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10353236-10354235 Capsella rubella
Carub.0005s2107 2.0kb upstream 2.0kb upstream 5534 true scaffold_5: 10347702-10353235 Capsella rubella
Carub.0005s2107 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10347702-10349701 Capsella rubella
Carub.0005s2107 2.0kb downstream 2.0kb downstream 5534 true scaffold_5: 10349702-10355235 Capsella rubella
Carub.0005s2107 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10353236-10355235 Capsella rubella
Carub.0005s2107 5.0kb upstream 5.0kb upstream 8534 true scaffold_5: 10344702-10353235 Capsella rubella
Carub.0005s2107 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10344702-10349701 Capsella rubella
Carub.0005s2107 5.0kb downstream 5.0kb downstream 8534 true scaffold_5: 10349702-10358235 Capsella rubella
Carub.0005s2107 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10353236-10358235 Capsella rubella
Carub.0005s2107 10.0kb upstream 10.0kb upstream 13534 true scaffold_5: 10339702-10353235 Capsella rubella
Carub.0005s2107 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10339702-10349701 Capsella rubella
Carub.0005s2107 10.0kb downstream 10.0kb downstream 13534 true scaffold_5: 10349702-10363235 Capsella rubella
Carub.0005s2107 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10353236-10363235 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368765 5261 Brassicaceae View MSA
123834357 5264 Brassicales-Malvales View MSA
124345677 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain