Gene : Carub.0005s2129 C. rubella v1.1
Defline:  (1 of 1) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  2129
Name:  ? Carub.0005s2129 Secondary Identifier:  ? PAC:39225685
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1269 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2129 0.5kb upstream 0.5kb upstream 1989 true scaffold_5: 10426565-10428553 Capsella rubella
Carub.0005s2129 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10426565-10427064 Capsella rubella
Carub.0005s2129 0.5kb downstream 0.5kb downstream 1989 true scaffold_5: 10427065-10429053 Capsella rubella
Carub.0005s2129 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10428554-10429053 Capsella rubella
Carub.0005s2129 1.0kb upstream 1.0kb upstream 2489 true scaffold_5: 10426065-10428553 Capsella rubella
Carub.0005s2129 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10426065-10427064 Capsella rubella
Carub.0005s2129 1.0kb downstream 1.0kb downstream 2489 true scaffold_5: 10427065-10429553 Capsella rubella
Carub.0005s2129 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10428554-10429553 Capsella rubella
Carub.0005s2129 2.0kb upstream 2.0kb upstream 3489 true scaffold_5: 10425065-10428553 Capsella rubella
Carub.0005s2129 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10425065-10427064 Capsella rubella
Carub.0005s2129 2.0kb downstream 2.0kb downstream 3489 true scaffold_5: 10427065-10430553 Capsella rubella
Carub.0005s2129 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10428554-10430553 Capsella rubella
Carub.0005s2129 5.0kb upstream 5.0kb upstream 6489 true scaffold_5: 10422065-10428553 Capsella rubella
Carub.0005s2129 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10422065-10427064 Capsella rubella
Carub.0005s2129 5.0kb downstream 5.0kb downstream 6489 true scaffold_5: 10427065-10433553 Capsella rubella
Carub.0005s2129 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10428554-10433553 Capsella rubella
Carub.0005s2129 10.0kb upstream 10.0kb upstream 11489 true scaffold_5: 10417065-10428553 Capsella rubella
Carub.0005s2129 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10417065-10427064 Capsella rubella
Carub.0005s2129 10.0kb downstream 10.0kb downstream 11489 true scaffold_5: 10427065-10438553 Capsella rubella
Carub.0005s2129 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10428554-10438553 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122370553 5261 Brassicaceae View MSA
123839402 5264 Brassicales-Malvales View MSA
124350596 5266 SBM View MSA
124238652 5268 Malvidae View MSA
124065763 5270 Rosid View MSA
123738105 5271 Pentapetalae View MSA
122788846 5272 Eudicot View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain