Gene : Carub.0005s2143 C. rubella v1.1
Defline:  (1 of 2) PTHR22950//PTHR22950:SF240 - AMINO ACID TRANSPORTER // TRANSMEMBRANE AMINO ACID TRANSPORTER-RELATED Genomic Order:  2143
Name:  ? Carub.0005s2143 Secondary Identifier:  ? PAC:39226104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2143 0.5kb upstream 0.5kb upstream 2229 true scaffold_5: 10480980-10483208 Capsella rubella
Carub.0005s2143 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10482709-10483208 Capsella rubella
Carub.0005s2143 0.5kb downstream 0.5kb downstream 2229 true scaffold_5: 10480480-10482708 Capsella rubella
Carub.0005s2143 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10480480-10480979 Capsella rubella
Carub.0005s2143 1.0kb upstream 1.0kb upstream 2729 true scaffold_5: 10480980-10483708 Capsella rubella
Carub.0005s2143 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10482709-10483708 Capsella rubella
Carub.0005s2143 1.0kb downstream 1.0kb downstream 2729 true scaffold_5: 10479980-10482708 Capsella rubella
Carub.0005s2143 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10479980-10480979 Capsella rubella
Carub.0005s2143 2.0kb upstream 2.0kb upstream 3729 true scaffold_5: 10480980-10484708 Capsella rubella
Carub.0005s2143 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10482709-10484708 Capsella rubella
Carub.0005s2143 2.0kb downstream 2.0kb downstream 3729 true scaffold_5: 10478980-10482708 Capsella rubella
Carub.0005s2143 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10478980-10480979 Capsella rubella
Carub.0005s2143 5.0kb upstream 5.0kb upstream 6729 true scaffold_5: 10480980-10487708 Capsella rubella
Carub.0005s2143 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10482709-10487708 Capsella rubella
Carub.0005s2143 5.0kb downstream 5.0kb downstream 6729 true scaffold_5: 10475980-10482708 Capsella rubella
Carub.0005s2143 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10475980-10480979 Capsella rubella
Carub.0005s2143 10.0kb upstream 10.0kb upstream 11729 true scaffold_5: 10480980-10492708 Capsella rubella
Carub.0005s2143 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10482709-10492708 Capsella rubella
Carub.0005s2143 10.0kb downstream 10.0kb downstream 11729 true scaffold_5: 10470980-10482708 Capsella rubella
Carub.0005s2143 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10470980-10480979 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338520 5261 Brassicaceae View MSA
123779087 5264 Brassicales-Malvales View MSA
124277420 5266 SBM View MSA
124239656 5268 Malvidae View MSA
124039926 5270 Rosid View MSA
123741277 5271 Pentapetalae View MSA
122770029 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain