Gene : Carub.0005s2400 C. rubella v1.1
Defline:  (1 of 2) PTHR11089//PTHR11089:SF38 - GTP-BINDING PROTEIN-RELATED // GTP BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2 Genomic Order:  2400
Name:  ? Carub.0005s2400 Secondary Identifier:  ? PAC:39226024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6845 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2400 0.5kb upstream 0.5kb upstream 3129 true scaffold_5: 11434675-11437803 Capsella rubella
Carub.0005s2400 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11437304-11437803 Capsella rubella
Carub.0005s2400 0.5kb downstream 0.5kb downstream 3129 true scaffold_5: 11434175-11437303 Capsella rubella
Carub.0005s2400 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11434175-11434674 Capsella rubella
Carub.0005s2400 1.0kb upstream 1.0kb upstream 3629 true scaffold_5: 11434675-11438303 Capsella rubella
Carub.0005s2400 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11437304-11438303 Capsella rubella
Carub.0005s2400 1.0kb downstream 1.0kb downstream 3629 true scaffold_5: 11433675-11437303 Capsella rubella
Carub.0005s2400 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11433675-11434674 Capsella rubella
Carub.0005s2400 2.0kb upstream 2.0kb upstream 4629 true scaffold_5: 11434675-11439303 Capsella rubella
Carub.0005s2400 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11437304-11439303 Capsella rubella
Carub.0005s2400 2.0kb downstream 2.0kb downstream 4629 true scaffold_5: 11432675-11437303 Capsella rubella
Carub.0005s2400 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11432675-11434674 Capsella rubella
Carub.0005s2400 5.0kb upstream 5.0kb upstream 7629 true scaffold_5: 11434675-11442303 Capsella rubella
Carub.0005s2400 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11437304-11442303 Capsella rubella
Carub.0005s2400 5.0kb downstream 5.0kb downstream 7629 true scaffold_5: 11429675-11437303 Capsella rubella
Carub.0005s2400 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11429675-11434674 Capsella rubella
Carub.0005s2400 10.0kb upstream 10.0kb upstream 12629 true scaffold_5: 11434675-11447303 Capsella rubella
Carub.0005s2400 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11437304-11447303 Capsella rubella
Carub.0005s2400 10.0kb downstream 10.0kb downstream 12629 true scaffold_5: 11424675-11437303 Capsella rubella
Carub.0005s2400 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11424675-11434674 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373228 5261 Brassicaceae View MSA
123828805 5264 Brassicales-Malvales View MSA
124342889 5266 SBM View MSA
124239066 5268 Malvidae View MSA
124068202 5270 Rosid View MSA
123737776 5271 Pentapetalae View MSA
122786234 5272 Eudicot View MSA
122044948 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain