Gene : Carub.0005s2412 C. rubella v1.1
Defline:  (1 of 4) PTHR32227:SF49 - BETA-1,3-GLUCANASE 1-RELATED Genomic Order:  2412
Name:  ? Carub.0005s2412 Secondary Identifier:  ? PAC:39225346
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2412 0.5kb upstream 0.5kb upstream 2432 true scaffold_5: 11480141-11482572 Capsella rubella
Carub.0005s2412 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11482073-11482572 Capsella rubella
Carub.0005s2412 0.5kb downstream 0.5kb downstream 2432 true scaffold_5: 11479641-11482072 Capsella rubella
Carub.0005s2412 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11479641-11480140 Capsella rubella
Carub.0005s2412 1.0kb upstream 1.0kb upstream 2932 true scaffold_5: 11480141-11483072 Capsella rubella
Carub.0005s2412 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11482073-11483072 Capsella rubella
Carub.0005s2412 1.0kb downstream 1.0kb downstream 2932 true scaffold_5: 11479141-11482072 Capsella rubella
Carub.0005s2412 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11479141-11480140 Capsella rubella
Carub.0005s2412 2.0kb upstream 2.0kb upstream 3932 true scaffold_5: 11480141-11484072 Capsella rubella
Carub.0005s2412 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11482073-11484072 Capsella rubella
Carub.0005s2412 2.0kb downstream 2.0kb downstream 3932 true scaffold_5: 11478141-11482072 Capsella rubella
Carub.0005s2412 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11478141-11480140 Capsella rubella
Carub.0005s2412 5.0kb upstream 5.0kb upstream 6932 true scaffold_5: 11480141-11487072 Capsella rubella
Carub.0005s2412 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11482073-11487072 Capsella rubella
Carub.0005s2412 5.0kb downstream 5.0kb downstream 6932 true scaffold_5: 11475141-11482072 Capsella rubella
Carub.0005s2412 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11475141-11480140 Capsella rubella
Carub.0005s2412 10.0kb upstream 10.0kb upstream 11932 true scaffold_5: 11480141-11492072 Capsella rubella
Carub.0005s2412 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11482073-11492072 Capsella rubella
Carub.0005s2412 10.0kb downstream 10.0kb downstream 11932 true scaffold_5: 11470141-11482072 Capsella rubella
Carub.0005s2412 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11470141-11480140 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375569 5261 Brassicaceae View MSA
123835945 5264 Brassicales-Malvales View MSA
124347459 5266 SBM View MSA
124248402 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain