Gene : Carub.0005s2404 C. rubella v1.1
Defline:  (1 of 1) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Genomic Order:  2404
Name:  ? Carub.0005s2404 Secondary Identifier:  ? PAC:39225731
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2404 0.5kb upstream 0.5kb upstream 4206 true scaffold_5: 11453092-11457297 Capsella rubella
Carub.0005s2404 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11453092-11453591 Capsella rubella
Carub.0005s2404 0.5kb downstream 0.5kb downstream 4206 true scaffold_5: 11453592-11457797 Capsella rubella
Carub.0005s2404 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11457298-11457797 Capsella rubella
Carub.0005s2404 1.0kb upstream 1.0kb upstream 4706 true scaffold_5: 11452592-11457297 Capsella rubella
Carub.0005s2404 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11452592-11453591 Capsella rubella
Carub.0005s2404 1.0kb downstream 1.0kb downstream 4706 true scaffold_5: 11453592-11458297 Capsella rubella
Carub.0005s2404 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11457298-11458297 Capsella rubella
Carub.0005s2404 2.0kb upstream 2.0kb upstream 5706 true scaffold_5: 11451592-11457297 Capsella rubella
Carub.0005s2404 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11451592-11453591 Capsella rubella
Carub.0005s2404 2.0kb downstream 2.0kb downstream 5706 true scaffold_5: 11453592-11459297 Capsella rubella
Carub.0005s2404 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11457298-11459297 Capsella rubella
Carub.0005s2404 5.0kb upstream 5.0kb upstream 8706 true scaffold_5: 11448592-11457297 Capsella rubella
Carub.0005s2404 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11448592-11453591 Capsella rubella
Carub.0005s2404 5.0kb downstream 5.0kb downstream 8706 true scaffold_5: 11453592-11462297 Capsella rubella
Carub.0005s2404 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11457298-11462297 Capsella rubella
Carub.0005s2404 10.0kb upstream 10.0kb upstream 13706 true scaffold_5: 11443592-11457297 Capsella rubella
Carub.0005s2404 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11443592-11453591 Capsella rubella
Carub.0005s2404 10.0kb downstream 10.0kb downstream 13706 true scaffold_5: 11453592-11467297 Capsella rubella
Carub.0005s2404 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11457298-11467297 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368242 5261 Brassicaceae View MSA
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain