Gene : Carub.0005s2436 C. rubella v1.1
Defline:  (1 of 4) K06617 - raffinose synthase (E2.4.1.82) Genomic Order:  2436
Name:  ? Carub.0005s2436 Secondary Identifier:  ? PAC:39226488
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5337 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2436 0.5kb upstream 0.5kb upstream 5075 true scaffold_5: 11571448-11576522 Capsella rubella
Carub.0005s2436 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11576023-11576522 Capsella rubella
Carub.0005s2436 0.5kb downstream 0.5kb downstream 5075 true scaffold_5: 11570948-11576022 Capsella rubella
Carub.0005s2436 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11570948-11571447 Capsella rubella
Carub.0005s2436 1.0kb upstream 1.0kb upstream 5575 true scaffold_5: 11571448-11577022 Capsella rubella
Carub.0005s2436 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11576023-11577022 Capsella rubella
Carub.0005s2436 1.0kb downstream 1.0kb downstream 5575 true scaffold_5: 11570448-11576022 Capsella rubella
Carub.0005s2436 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11570448-11571447 Capsella rubella
Carub.0005s2436 2.0kb upstream 2.0kb upstream 6575 true scaffold_5: 11571448-11578022 Capsella rubella
Carub.0005s2436 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11576023-11578022 Capsella rubella
Carub.0005s2436 2.0kb downstream 2.0kb downstream 6575 true scaffold_5: 11569448-11576022 Capsella rubella
Carub.0005s2436 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11569448-11571447 Capsella rubella
Carub.0005s2436 5.0kb upstream 5.0kb upstream 9575 true scaffold_5: 11571448-11581022 Capsella rubella
Carub.0005s2436 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11576023-11581022 Capsella rubella
Carub.0005s2436 5.0kb downstream 5.0kb downstream 9575 true scaffold_5: 11566448-11576022 Capsella rubella
Carub.0005s2436 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11566448-11571447 Capsella rubella
Carub.0005s2436 10.0kb upstream 10.0kb upstream 14575 true scaffold_5: 11571448-11586022 Capsella rubella
Carub.0005s2436 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11576023-11586022 Capsella rubella
Carub.0005s2436 10.0kb downstream 10.0kb downstream 14575 true scaffold_5: 11561448-11576022 Capsella rubella
Carub.0005s2436 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11561448-11571447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372052 5261 Brassicaceae View MSA
123831242 5264 Brassicales-Malvales View MSA
124344017 5266 SBM View MSA
124249240 5268 Malvidae View MSA
124064190 5270 Rosid View MSA
123740319 5271 Pentapetalae View MSA
122793686 5272 Eudicot View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain